Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1747 ATGCATGAGAAGAATTATCAAGGAAGCATGGCTAATTTTGAAGACCGTGAGCTGCTGATGATGTCAGAAACAGATGCACAATCATATGATGAAACTTTGCACTCTAAATTCCAAAGGCTTTTATCCAGGACACAAAGTGCATCAGTTTCTATTCCCATGGAGTCATATGAGAGAAAAACTAGTATTGTGGGACATAGTGGTTCACTCTATGCTAATGCTACACCAGGAACTGATAATCTCTTGCAGCATAGTATAGTTGTAACAGGAAACAAAACAGAGGAGAGCAAGACAGATAAATTTGCTACTTTCATCAGCACAGATAAATTTGATAGTAAAAATGAACATTTACTGATATCCGGACAACTGGGAATTTGTAATGATCCTTATTGTACTACTTGTCCTACTTACTTCGAGGCTTCTCAGCTAAGAAATCCAAAAGCTTCAATTCTATCTGATCCCAAGTTCCACAATGCTCTTTATGGGGATGCCAAGGGTTTCGCTAGAAAACTTTTTTCCTTCTGTTCTTCTTTTGTTCCTGGAGTTATGAACCCTCACTCTAAATTCATACAACATTGGAACAAGGTTCTCGCCACTTTTTGCTTGGTTGCAATTTTTGTGGATCCATTATTTTTCTTCTTACTCTATGTTCGTCAGGATTTTAATTGCATAGTTGTCAACTGGAAATTGACAAAAGCACTTGTTATAGTTAGAAGCATGAATGACTTCATATATTGTCTTAACATTCTTCTCCAGTTTAGGTTGGCTTTTGTTTCTCCTGAGTCGAGGGTGGTTGGTGCTGGAGATTTAGTTGACCATCCAAAGAAAATTGCTCTTCGTTACCTGAAGGGTTATTTTCTTATTGACTTATTTGTTGTATTTCCTCTTCCTCAGGTAATGTTATTGTCTGTCCTACCAAATTCCTTGAGGGGAGCAAATTATGCTAAAAATGTCCTGCGTGCAGCGATCCTAGTACAATATATTCCCAGATTATTCAGGTTTCTGCCTATGCTGTTTGGCCAATCTCCTGCAGGATTCATATTTGAGTCAGCATGGGCAAATTTCATAATAAACCTTCTTATTTTTATGCTAGCTAGCCATGTTGTTGGCTCTTGCTGGTACCTCTTTGCGCTACAGAGGGTTAATCAATGTTTTCGAAATGCATGCCATACTTCTAATATACCTGGATGCCTGACATTCATTGATTGTGGACATAGCCATAATGGACACAATCAGCCTGGTCTATCATCAAACCAGTGGAACAACCATATAGATGCTATTGCGTGTTGGAATTCCTCTTCCGGTGGTTCTTTTGCTTACGGGATTTACGCCAATGCTGTACCTCTTACTACACAAACAGACATGGTCATCAAATACATATATGCTCTATTTTGGGGATTACAGCAAATCAGTACTCTGGCTGGTAACCAAACACCTAGCGATTTTGTGTGGGAAGTCCTTTTTACTATGGCCATCGTGGGATTGGGACTTTTTCTTTTTGCACTTCTCATTGGAAACATACAGAACTTTCTTCAAGGTCTTGGACGGAGGAGGCTAGAAATGCAACTTAGAAGCCGTGATGTTGAGCAATGGATGAGTCATCGGCGCTTACCCGAATACCTAAGAAGGAGAGTACGAGAGGCTGAACGGTATAGTTGGACCGCAACAAGGGGGGTGAATGAAGCAGTGCTCATGGAGAATTTTCCAGAAGATCTCCAAGTGGACATAAGACGCCATCTCTTCAAATTTGTTAAGAAAGTTCGGATTTTTGCTCTGATGGATGAGCCTATATTAGATGCCATTTGCACGAGATTAAGACAGTCGACATACATCAAAGGAAGTAGAATTTTGAGTCATGGTGCTGTGGTAGACAAGATGCTATTCGTGGTGCGTGGTAAATTGGAGAGCATTGGAGAAGATGGAACTAGGATTCCTTTATCTGAAGGGGATGCTTGTGGTGAAGAACTCCTAACGTGGTATCTTGAGCATTCTTCAGTGAGCACGGATGGAAGAAGAGTAAGGCTTCCAGGACAGAGGTTGCTTAGCAACAGGACAGTAAGATGCTTAACAAATGTGGAAGCACTTTCACTCCGAGCTGCAAACCTTGAAGAAGTCACAATCCTTTTCACAAGATTCTTGCGTAGTTTGCGTGTTCAAGGAGCCTTAAGGTATGAATCACCCTATTGGAGATCCCTAGCAGCAATCCGCATTCAGGTTGCATGGAGATACAGGAAGAAACGACTAAGTCATGCTGATTCCTCTCTTCAAGATAAATTGGAGAATCATCAAGGAAACATGGCTCATTTTGAAAAAGATGAGGTGCCAATGCTGTCAGAAACACATGCTCGACTATCTGATGAAGTTGTGGATTCTAATTTCCGGAGGCTTGTATCTAGGACACGAAGTGCTTCAATTTCTATTCCTATGGCCTCCTTGGAATCATATGAGAAAGAAACTAATCTTGTAGGACATACTGGTCCACTTCGCAGTGTGAGAAAAACCCCCTTTGTGCAGATGAGTGGTCCACTGTATGCTACCAATGGAACTGGAAATCTTTCACGACAGAATATAGTTGTGACAGGAACCAAAGTAGTGGAGAGCAAGACAGAAAAGTTTTCTACTTTTGATGGCACGAATGAAAATCGTTGGGATAATGACTATGATAGAAAGAATGAGCACTTAATGAGGTCTGGGCAACTGGGAATGTGTAATGATCCTTGTTGTACTACTTGCCCCTCTTATGTCAAGGCTTCTCAACCAAGAACCCGGAAAACTTCAGCTATATTTGATCCCAAGTTCCACAATAATCTTTATGGGGATGCCAAGGGTTTTGGAAGAAAACTTTATTCCTTCTGCTCTCGATATGTTCTTGGAGTTATGAATCCTCATAATAAATTTCTACAACGATGGAACAAGATTTTGGCCATTTTTTGCTTGGTGGCAATTTTTGTTGATCCATTATTTTTCTTCTTAATCTATGTGAAGAAGAATGAAAAATGTATTGCTATCAATCAGACAATGACAACAACACTTGTTTTATTTAGAAGCATTAATGATTTGATATATTTCTTTAACATTCTTCTCCAGTTTAAGTTGGCTTATGTTTCTCCTGAGTCAACGGTAGTAGGTGCTGGAGATTTAGTTGACCATCCCAAGAAAATTGCTCTTAATTATCTGAAGGGTTATTTTTTCATCGACCTATTTGTTGTATTGCCTCTTCCTCAGATAATGATATTATTTGTCCTACCAAAGTACCTGGGATTATCAGGAGCAAATTATGCTAAAAATCTTCTGCGTGCTGCCATCCTTGTGCAGTATTTTCCCAGATTATTCAGATTTCTGCCTCTGCTAATTGGCCAGTCTCCTACAGGATTCATATTTGAGTCAGCCTGGGCAAATTTCATTATAAATCTTCTCATTTTTATGCTATCTGGCCATGTTGTTGGTTCTGGCTGGTACCTCTTTGGTCTACAGAGGGTTAATCAATGCTTGCGAAATGCCTGCCGTGATTCTAATATTACTGGATGCTCAGCATTCATTGATTGTGGCTATGGCCCTGACGATGTATCTGGCCGGGCAGAAGTGTGGAACAACAATGTAAATGCCACTGCTTGTTTGAATTCAAGTTCTGATGCTTTTAAGTATGGGATCTATGTAAATGCTGTACCACTTACTATAGAAACTAGGGTGGTCCACAAATATGTATTTGCACTGTTTTGGGGATTCCAGCAAATCAGTACCCTGGCTGGTAATCAAACCCCAAGCTATTTTGTGTGGGAAGTACTTTTTACAATGGCCATCATAGGATTGGGACTCTTGCTTTTTGCACTTCTCATTGGAAATATACAGAACTTTCTGCAGGCTCTTGGACGCAGGAGGCTAGAAATGCAACTTAGAGGTCGTGATGTTGAGCAATGGATGAGCCACCGTCGCTTACCCGAAGATCTAAGAAGGAGAGTACGTCATGCTGAACGGTATAGTTGGGCAGCAACAAGAGGAGTGAATGAAGAAATACTTCTGGAGAATATGCAGGAAGATCTCCAGACAGACATAAGACGTCATCTCTTCAAATTTGTTAAAAAAGTTCGAATCTTCGCCCTGATGGATGAGCCTATCTTAGATGCCATTTGTGAGAGACTAAAACAAAAGACATACATCAAAGGAAGTAAAGTTTTGAGTCAGGGGAGTCTTGTAGAGAAGATGGTCTTTGTTGTACGTGGGACATTGGAGAGCTTTGGGGATGATGGAACTATGGTTCCCTTATCTGAAGGGGATGCTTGTGGTGAAGAACTTCTGACATGGTATCTTGAGCATTCTTCTGTAAGCACAGATGGTAAAAAAGTAAGGGTTCAAGGACAGAGGTTGCTGAGCAACAGGACAGTAAGATGCTTAACAAACGTGGAGGCATTTTCACTTCGAGCTGCAGACCTTGAGGAACTGACAATTCTTTTCACAAGATTCTTGCGGAACCCTCATGTTCAAGGAGCACTAAGGTATGTATCACCTTACTGGAGATCCCTTGCAGCAAACCGTATTCAGGTTGCATGGAGATACAGGAAGAAGCGTCTAAGTCGTGCTAATACCTCGCAATCAGATCAAACATTGATTGCATAG 4611 0.4073 MHEKNYQGSMANFEDRELLMMSETDAQSYDETLHSKFQRLLSRTQSASVSIPMESYERKTSIVGHSGSLYANATPGTDNLLQHSIVVTGNKTEESKTDKFATFISTDKFDSKNEHLLISGQLGICNDPYCTTCPTYFEASQLRNPKASILSDPKFHNALYGDAKGFARKLFSFCSSFVPGVMNPHSKFIQHWNKVLATFCLVAIFVDPLFFFLLYVRQDFNCIVVNWKLTKALVIVRSMNDFIYCLNILLQFRLAFVSPESRVVGAGDLVDHPKKIALRYLKGYFLIDLFVVFPLPQVMLLSVLPNSLRGANYAKNVLRAAILVQYIPRLFRFLPMLFGQSPAGFIFESAWANFIINLLIFMLASHVVGSCWYLFALQRVNQCFRNACHTSNIPGCLTFIDCGHSHNGHNQPGLSSNQWNNHIDAIACWNSSSGGSFAYGIYANAVPLTTQTDMVIKYIYALFWGLQQISTLAGNQTPSDFVWEVLFTMAIVGLGLFLFALLIGNIQNFLQGLGRRRLEMQLRSRDVEQWMSHRRLPEYLRRRVREAERYSWTATRGVNEAVLMENFPEDLQVDIRRHLFKFVKKVRIFALMDEPILDAICTRLRQSTYIKGSRILSHGAVVDKMLFVVRGKLESIGEDGTRIPLSEGDACGEELLTWYLEHSSVSTDGRRVRLPGQRLLSNRTVRCLTNVEALSLRAANLEEVTILFTRFLRSLRVQGALRYESPYWRSLAAIRIQVAWRYRKKRLSHADSSLQDKLENHQGNMAHFEKDEVPMLSETHARLSDEVVDSNFRRLVSRTRSASISIPMASLESYEKETNLVGHTGPLRSVRKTPFVQMSGPLYATNGTGNLSRQNIVVTGTKVVESKTEKFSTFDGTNENRWDNDYDRKNEHLMRSGQLGMCNDPCCTTCPSYVKASQPRTRKTSAIFDPKFHNNLYGDAKGFGRKLYSFCSRYVLGVMNPHNKFLQRWNKILAIFCLVAIFVDPLFFFLIYVKKNEKCIAINQTMTTTLVLFRSINDLIYFFNILLQFKLAYVSPESTVVGAGDLVDHPKKIALNYLKGYFFIDLFVVLPLPQIMILFVLPKYLGLSGANYAKNLLRAAILVQYFPRLFRFLPLLIGQSPTGFIFESAWANFIINLLIFMLSGHVVGSGWYLFGLQRVNQCLRNACRDSNITGCSAFIDCGYGPDDVSGRAEVWNNNVNATACLNSSSDAFKYGIYVNAVPLTIETRVVHKYVFALFWGFQQISTLAGNQTPSYFVWEVLFTMAIIGLGLLLFALLIGNIQNFLQALGRRRLEMQLRGRDVEQWMSHRRLPEDLRRRVRHAERYSWAATRGVNEEILLENMQEDLQTDIRRHLFKFVKKVRIFALMDEPILDAICERLKQKTYIKGSKVLSQGSLVEKMVFVVRGTLESFGDDGTMVPLSEGDACGEELLTWYLEHSSVSTDGKKVRVQGQRLLSNRTVRCLTNVEAFSLRAADLEELTILFTRFLRNPHVQGALRYVSPYWRSLAANRIQVAWRYRKKRLSRANTSQSDQTLIA* 1537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1747 1536 CDD CAP_ED 588 704 IPR000595 -
Gso16g1747 1536 Gene3D - 186 512 - -
Gso16g1747 1536 Gene3D - 959 1288 - -
Gso16g1747 1536 ProSiteProfiles cAMP/cGMP binding motif profile. 1363 1431 IPR000595 -
Gso16g1747 1536 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 13 753 - -
Gso16g1747 1536 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 768 1528 - -
Gso16g1747 1536 SUPERFAMILY cAMP-binding domain-like 1291 1483 IPR018490 -
Gso16g1747 1536 ProSiteProfiles cAMP/cGMP binding motif profile. 588 656 IPR000595 -
Gso16g1747 1536 Pfam Ion transport protein 971 1291 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso16g1747 1536 Pfam Ion transport protein 194 515 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Gso16g1747 1536 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 13 753 - -
Gso16g1747 1536 PANTHER NUCLEOTIDE GATED CHANNEL PROTEIN, PUTATIVE-RELATED 768 1528 - -
Gso16g1747 1536 SUPERFAMILY cAMP-binding domain-like 516 711 IPR018490 -
Gso16g1747 1536 SUPERFAMILY Voltage-gated potassium channels 961 1291 - -
Gso16g1747 1536 SMART cnmp_10 1363 1481 IPR000595 -
Gso16g1747 1536 SMART cnmp_10 588 720 IPR000595 -
Gso16g1747 1536 SUPERFAMILY Voltage-gated potassium channels 184 516 - -
Gso16g1747 1536 CDD CAP_ED 1363 1479 IPR000595 -
Gso16g1747 1536 Gene3D Helix hairpin bin 515 580 - -
Gso16g1747 1536 Gene3D Helix hairpin bin 1290 1355 - -
Gso16g1747 1536 Gene3D Jelly Rolls 1361 1485 IPR014710 -
Gso16g1747 1536 Gene3D Jelly Rolls 586 710 IPR014710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1747 Gso-Chr16 38063857 38087458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1747 14 666 Ion Channels AT3G17700 55.718 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1747 K05391 - gsj:114390051 3051.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1747 16 38063857 38087458 Gso9g1388 9 37792250 37805880 GST