Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1741 ATGATGGTTGTGATGAGTGAAAACACTTTCTTTAGAAGAAGCTGTAATAAGAAAAGAAAGAAGGGAAGAAGAGAAAAAAAAATGTCACCGGTTGGATTACCACCTGGCTTTAGGTTCCATCCAACCGATGAAGAGCTTGTCAACTATTATCTCAAGAGGAAGATCAATGGCCAAGAAATTGAACTTGATATCATTCCTGAAGTTGATCTCTACAAATGTGAACCATGGGAATTAGCAGAGAAATCATTTTTGCCAAGTAGAGACCCAGAGTGGTATTTTTTCGGCCCCCGGGATAGGAAATACCCGAATGGGTATAGGACAAATAGAGCAACTCGGGCAGGTTACTGGAAGTCCACTGGGAAAGACAGAAGAGTTTCATGCCAAAGCAGACCTATTGGCATGAAGAAGACTTTGGTGTACTATAGAGGTAGAGCTCCTCAAGGGATCAGAACTGACTGGGTAATGCATGAGTATCGCCTTGATGACAAAGAGTGTGAGGACACCACTGGATTACAGGATACTTATGCATTGTGCCGTGTGTTCAAGAAAAATGGAATCTGTTCTGATATTGAAGAGCAAGGACAATGTAGTATATCACTAATTGAGAGCTCCCAAACCATTACTAATGAGTGTGAAACCATGTCTCCTGACATACCAGGGGCATCATCATCATGCTTGGAAGAGGAGGACAAAGATGATTCTTGGATGCAGTTCATTACAGAAGATGCATGGTATTCTTCTAATGCAGCTATGGTTGGTGGTGAAGAAGTATCACATGTTACATTTACAAACTAA 795 0.4126 MMVVMSENTFFRRSCNKKRKKGRREKKMSPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGYRTNRATRAGYWKSTGKDRRVSCQSRPIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKECEDTTGLQDTYALCRVFKKNGICSDIEEQGQCSISLIESSQTITNECETMSPDIPGASSSCLEEEDKDDSWMQFITEDAWYSSNAAMVGGEEVSHVTFTN* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1741 264 Gene3D NAC domain 42 186 IPR036093 GO:0003677|GO:0006355
Gso16g1741 264 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 18 264 - -
Gso16g1741 264 PANTHER NAC DOMAIN-CONTAINING PROTEIN 86-LIKE 18 264 - -
Gso16g1741 264 Pfam No apical meristem (NAM) protein 34 160 IPR003441 GO:0003677|GO:0006355
Gso16g1741 264 ProSiteProfiles NAC domain profile. 33 183 IPR003441 GO:0003677|GO:0006355
Gso16g1741 264 SUPERFAMILY NAC domain 28 183 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1741 Gso-Chr16 37982436 37986106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1741 28 253 NAC Transcription Factor Family AT3G17730 75.934 8.95e-133 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso16g1741 NAM 1.3e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1741 - - gmx:100784495 554.288
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1741 16 37982436 37986106 Gso9g1379 9 37663318 37667226 GST