Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1696 ATGACTGTGTCAGCATCCTTCAGCTACGATGTGTTCCTCAGCTTCAGAGGCTCTGATACTCGCTACGGTTTTACTGGCAATCTCTATAATGCTCTAAGTGATAGGGGAATCCATACCTTCATTGATGAAGAGGAGCTTCAAAGAGGTGATGAAATTAGACCGGCACTTGTTGAGGCCATTAAACAGTCTAGGATGGCCATCCTTGTGTTCTCTAAGAACTATGCATCTTCTTCGTTTTGCTTAGATGAACTTGTTAAAATCATGGAGTGTGTTAAGGCAAAGGGTCGGTTGATTTTTCCCATTTTTTATGATGTGGATCCTTGTCATGTGCGGCATCAGTCTGGGAGTTATGGAGAAGCGTTGGCTATGCACGAGGAAAGGTTCACAAGTAGCAAGGAAAACCTCAAGGAGAACATGGAGAGGTTGCAGAAATGGAAGATGGCTCTTAACCAAGCAGCTGATGTGTCTGGCAAGCATTACAAACTTGGAAATGAATATGAACATGAGTTTATTGGGAAGATAGTTAAAGAGATCTCCAACAAGATTAACCGTACACCTTTACATGTTGCGGATTACCCTGTTGGGCTGGAGTCTCGAGTACAAACAGTAAAGTCACTTCTGGAATTTGAATCTGATACTGGAGTACACATTGTAGGGATTTATGGAATAGGCGGCATGGGCAAAACAACACTTGCTCGAGCAGTTTATAATTCAATTGCAGACCAATTTAAAGGTTTATGTTTTCTTGATGATGTGAGAGAAAATGCTACTAAACACGGGTTAATACATCTCCAAGAGATGCTTCTTTCTGAAATAGTTGGAGAGAAGGATATTAAGATAGGAAGTGTTAGTAAAGGAATTTCAATAATAAAGCACAGGCTCCAGCGAAAGAAGATTCTTTTAATTCTTGATGATGTTGACAAACTAGAACAACTGCGGGCAACTGTTGGAGGGCCTAATTGGTTTGGTTCTGGCAGTAGAGTCATCGTAACTACTCGGGACAAACATTTGCTTGCAAGTCATGGGGTTGATAGAAAATATGAGGTAGAGGATTTAAATGAGGAAGAATCACTTGAATTGCTTTGTTGGAATGCTTTTAAAGATGACAAAGTTGATCCATGTTACAAGGACATTTCAAGCCAAGCAGTGGCTTATGCTTCTGGCCTTCCACTAGCTTTGGAAGTTGTAGGTTCTCTATTGTTTGGGAAAGGCATAAAAGAATGGGAATCTGCGTTAGAACAGTATAAAAAAATTCCTAATAAAAGGATCCAAGATATACTTAAGGTAAGCTATAATGCTTTGGAAGAAGATCAGCAGAAAATTTTTCTCGACATCGCTTGTTGCTTGAAAGGATATGAATTGGCAGAGGTTGAAGATATACTTTGTGCTCATTATGGTGTTTGCATGAAATATGGCATAGGAGTGTTGGTTGACAAATCTCTCATAAAAATTAAGAATGGCCGTGTGACACTTCATGAATTGATAGAGGTTATGGGTAAAGAAATTGATCGACAAGAATCACCGAAAGAGCTTGGAAAACACAGGAGGCTATGGTTCCATAAAGATATAATTCAAGTTTTAGCAGAAAATACAGGGACTAGTGAGATTGAAATAATCTCTTTGGATTTCCCCTTATTTGAAGAAGACGAAGAAGCATATGTAGAATGGGATGGAGAGGCCTTCAAGAAGATGGAAAACCTCAAAACATTAATTATTAGAAATTCTCATTTTTCAAAAGGTCCCACACATCTTCCAAATAGTTTAAGAGTATTAGAATGGTGGACTTACCCATTACAGGATTTACCAACCGATTTTCATTCAAACAAACTTGCCATATGCAAATTACCCAGAAGTTGTTTTACATCACTTGAGTTATCTGGCATATCGAAGAAGTTCATGAATCTCACAGTTTTAAATTTTGACGGGACTGAATGTTTAACCCAGATACCTGACATATCCAGTCTCCAGAATTTAGTAAAATTGACATTTGAATGTTGTGAGAATTTAGTTGCAATTCATGATTCGGTCGGTTTTCTAGATAAACTTAAAATCTTGAGTGCTTTTGGTTGCGGCAAGCTTATGAGTTTTCCACCCATCAAGTTAATCTCTCTTGAACAACTTGATCTTTCATCTTGTTCAAGTCTTGAGAGTTTTCCAGAAATTTTAGGAAAGATGGAAAATATAACACAGCTTGAGTTGAAGTACACTCCTTTAAAAGAATTCCCATTTTCATTCAGAAATCTTGCTCGACTTCGAGATTTAGTGCTGGTTGACTGTGGAAATGTTCAGCTACCGATTAGCATTGTCATGTTGCCAGAACTGGCTCAGATTTTTGCTCTGGGATGCAAAGGGTTGCTATTGCCAAAACAAGACAAGGATGAAGAAGAAGTGAGCTCAATGTCTTCAAATGTAAACTGTCTTTGTCTCTCAGGCTGCAATCTATCAGATGAATATTTTCCCATGGTTTTAGCATGGTTTAGTAATGTGAAAGAGTTAGAGCTATCGTGCAATAACTTCACATTTCTTCCTGAATGCATCAAAGAATGTCACTCTTTAATATTACTTAATTTGGATAATTGTGAGCATCTTCAAGAAATTAGAGGGATTCCACCAAATTTAGAATATTTCTCGGCTGGAAATTGCAAATCCTTGAGTTTCTGCTGTACAGCCATGTTATTGAATCAGGAGCTACATGAGACTGGAAACACCATGTTTTGTTTGCCGGGAACAAGGAGTCCAGAGTGGTTTGAGCAACAAAGTATAGGTCCATCATTATCTTTCTGGTTTCGTAACAAGTTCCCTGTCATGGATCTCTGTTTTGTTATTGGACCAATGGGTAAGGACTCTATTTTGTTTAGACCCATCATGACCATCAATGGCAACACAATGGAGACACAGTTAACTGAAAAGAGGTGTTGTTTAGACTTCCGAGCATTAGATTATCATATACTTATCATTGGTACAAAATACATGAAGTTCGGAGAGTGTCTAGATAAACCTCTCACAAAAAATGAATGGAATCATGTGGTGGTTTCCATTGGTATTGAACCAACCCCTAAGGATGTGATTGTCAAGCAAACTGGACTCCATGTAATCAAACCAGAAAGTAGCATGGATGATGTCCAATTCACCAATCCTTATAAGCAACCATCCTTTAAAGAGAAGCAAAGATTGGTGGACATAGTTGATTGTCATAGACAATTTATGCAGCAGCAAACCACTTTGGTTTCATTAAAACCACATGTGAGACAGGGCGGAGAGTCATTTTCATTGCTTCCACCTCAAGCATGCAAAAATAATATGAATTGGGATTCAAATTCAACTGGAATAACTAGCACTTCCAGTGTCCAGGGTTATGAAATTGCATTACAAAATTTACGGTTGGACATGGGAGTTTTACAATTTGTGCAGCAGCGAAAAAGATTGGCTATATTAGGTTTATCGCAACAACGCCGAATGGCTTCATTGGATTTACAGCAGCGGCGGGGCAGAGAAATGGTTTCCTTGCTTTCTTCTCCATCATTGGAGTTGATGGTATCATGGCAGAGGAGATGCATCACCAGTGTCCAAGGTTTGCAAGAGCAACATTTACCTTCCACCATCAAACAAAACTTTGAAGGCTGTAATGGCATATATGAAGCCAAAGTGAGTGAAATGGTAGAATGTAACAGCAATGATGGAAACGACAATGACAGAACCTCCTCACCGGTGGAGCAATTACCAATGGCAAAGGAGGATCGTGTTCCTAGCAAGAAATACCAACATGTCTCGAATATGGCTTGGGATCCAATGGAATTAGAATATCTTGTGCATATCCAGAAGATCAATTTGTCTCAAACGACACAAACTCTGTAA 3855 0.3883 MTVSASFSYDVFLSFRGSDTRYGFTGNLYNALSDRGIHTFIDEEELQRGDEIRPALVEAIKQSRMAILVFSKNYASSSFCLDELVKIMECVKAKGRLIFPIFYDVDPCHVRHQSGSYGEALAMHEERFTSSKENLKENMERLQKWKMALNQAADVSGKHYKLGNEYEHEFIGKIVKEISNKINRTPLHVADYPVGLESRVQTVKSLLEFESDTGVHIVGIYGIGGMGKTTLARAVYNSIADQFKGLCFLDDVRENATKHGLIHLQEMLLSEIVGEKDIKIGSVSKGISIIKHRLQRKKILLILDDVDKLEQLRATVGGPNWFGSGSRVIVTTRDKHLLASHGVDRKYEVEDLNEEESLELLCWNAFKDDKVDPCYKDISSQAVAYASGLPLALEVVGSLLFGKGIKEWESALEQYKKIPNKRIQDILKVSYNALEEDQQKIFLDIACCLKGYELAEVEDILCAHYGVCMKYGIGVLVDKSLIKIKNGRVTLHELIEVMGKEIDRQESPKELGKHRRLWFHKDIIQVLAENTGTSEIEIISLDFPLFEEDEEAYVEWDGEAFKKMENLKTLIIRNSHFSKGPTHLPNSLRVLEWWTYPLQDLPTDFHSNKLAICKLPRSCFTSLELSGISKKFMNLTVLNFDGTECLTQIPDISSLQNLVKLTFECCENLVAIHDSVGFLDKLKILSAFGCGKLMSFPPIKLISLEQLDLSSCSSLESFPEILGKMENITQLELKYTPLKEFPFSFRNLARLRDLVLVDCGNVQLPISIVMLPELAQIFALGCKGLLLPKQDKDEEEVSSMSSNVNCLCLSGCNLSDEYFPMVLAWFSNVKELELSCNNFTFLPECIKECHSLILLNLDNCEHLQEIRGIPPNLEYFSAGNCKSLSFCCTAMLLNQELHETGNTMFCLPGTRSPEWFEQQSIGPSLSFWFRNKFPVMDLCFVIGPMGKDSILFRPIMTINGNTMETQLTEKRCCLDFRALDYHILIIGTKYMKFGECLDKPLTKNEWNHVVVSIGIEPTPKDVIVKQTGLHVIKPESSMDDVQFTNPYKQPSFKEKQRLVDIVDCHRQFMQQQTTLVSLKPHVRQGGESFSLLPPQACKNNMNWDSNSTGITSTSSVQGYEIALQNLRLDMGVLQFVQQRKRLAILGLSQQRRMASLDLQQRRGREMVSLLSSPSLELMVSWQRRCITSVQGLQEQHLPSTIKQNFEGCNGIYEAKVSEMVECNSNDGNDNDRTSSPVEQLPMAKEDRVPSKKYQHVSNMAWDPMELEYLVHIQKINLSQTTQTL* 1285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1696 1284 Pfam NB-ARC domain 199 434 IPR002182 GO:0043531
Gso16g1696 1284 Gene3D - 6 179 IPR035897 -
Gso16g1696 1284 SUPERFAMILY L domain-like 555 907 - -
Gso16g1696 1284 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 445 IPR027417 -
Gso16g1696 1284 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 19 1013 IPR044974 GO:0006952
Gso16g1696 1284 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 157 IPR035897 -
Gso16g1696 1284 MobiDBLite consensus disorder prediction 1222 1251 - -
Gso16g1696 1284 Gene3D - 351 435 IPR042197 -
Gso16g1696 1284 Gene3D - 180 344 IPR027417 -
Gso16g1696 1284 MobiDBLite consensus disorder prediction 1222 1237 - -
Gso16g1696 1284 Gene3D Ribonuclease Inhibitor 791 900 IPR032675 -
Gso16g1696 1284 SMART AAA_5 214 353 IPR003593 -
Gso16g1696 1284 Coils Coil 132 152 - -
Gso16g1696 1284 CDD AAA 194 334 - -
Gso16g1696 1284 Pfam TIR domain 9 186 IPR000157 GO:0007165
Gso16g1696 1284 PRINTS Disease resistance protein signature 217 232 - -
Gso16g1696 1284 PRINTS Disease resistance protein signature 293 307 - -
Gso16g1696 1284 PRINTS Disease resistance protein signature 386 400 - -
Gso16g1696 1284 PRINTS Disease resistance protein signature 699 715 - -
Gso16g1696 1284 PANTHER ARCHAEAL ATPASE 19 1013 - -
Gso16g1696 1284 ProSiteProfiles TIR domain profile. 7 182 IPR000157 GO:0007165
Gso16g1696 1284 Gene3D Ribonuclease Inhibitor 548 790 IPR032675 -
Gso16g1696 1284 SUPERFAMILY "Winged helix" DNA-binding domain 422 527 IPR036390 -
Gso16g1696 1284 SMART till_3 8 155 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1696 Gso-Chr16 37565526 37572812 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1696 4 832 WRKY Transcription Factor Family AT4G12020 30.572 3.49e-81 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1696 - - gmx:100814962 2471.43