Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1695 ATGGAACTAAATGCGTGCGAGGAATTGGCGAAAATTGCTTCGGATTTCAAGTGCGAGAAGGTTCTCAAAACAGTTGATGAATCAATCGTATGCCCCACTCCACAGAAGAACAAGGAACCCTTAACCGTTAAATCCAGAGAGGGACAAACCAACCTTCCTGAAAAATACTCTACGCTTGCTGATTTGTTTGGTCACATGAGTTGTTCACTCAGATTGCTGCATCTGTGTAAAAAGACTCCAATTTTTCAAAATGTTTGCCGCCAGGTCGAAGTTCTTTCGAAGAGGAAATTCTCCCATGCTCATCTTGCGCAGATGAAGTATATACTCCCTAAAAGTGTGTGTATTGATAAGGTGCTTGTTCATGATAAGAAAAGCTTGTGTATGGTACCTGATATGAAGATCACCTTGAAATTTGAGGTTGTGAAAGATTGCTCTGGCGACTCTGCTGATCTGGCTCTTCGACGATATTTTAAATCTAAGCTGATTGATTTCTTTGATATGCATCCTGAGGTTGCTGACATTCCAGAGGCCCCACTGCCAGAACCCTTTGGCAAAATATCTTGTAGATCGAATTGTAAAGATTCACATGTTGAAGAATTTACTGGCCAATCCCCGCATGTAAATTCTTCAACGGAACTTTTTTCAATTTCCAATCAAACTGAAATGTTGCCAGAGCAATTGCAATTGTATCCATCTTTCAGTAGACACTTTTCTAGGAAGAATAATACCGACCAGGCAGAAAAGGCTCAGTGTTTTTTACCCACAAAAACTTCTCCATCATCTCATGCATTTGATTTTCTGGATAATGAAGAAAGTGAAAAAACACTGCAGAAAGAATGCGTACCATTATATGATGATGTGGCTAATCCTATTATGGAAAGAGGGCACCAGAAGGAATCATTTTCTATGTCTTTTGAACCTAGTGTTATTAATACACCAGTACATATGATCCACCCTCCCCATTCTGTTACATGCAGTGATTCTGAAAGCCCATATTTGAAAAATATCTCCTGTGCTGCTGATAGTTTTATTGCAGAGACACCTGCCCAGTCAGCACCTGCGAGATTATTGCCCATTTCTGATGTTAAGCTTCAGGACATGCCTACCCAAAAGTCAACATCATCTTATAAGCCAGCAAAAAGAGTGCTTGACTTTTCCCTCATGGAGGACAATGATGGCTTGGGCATTGAAATGGACAAGTTAGAATCTATCAGAGCTCTGCATGAAGTTGATAGCTTCCCTGAATCTAGCAGAGGATGTTCTGAGGATTGCAACTCTTTTGGTTCTGTTTCTGCACCTCAGGAGGCAGAAGAGAGCCTTGGTTATGCTTCTGAGAAAATTACCCAAAAGCAAGCTGATTTAGATACACAGCACAAAAAACCTTCACCATTGCTGAATCTGGTTAATGTGATACACTCTATATTTCAATCTGTTCAAAGAATTCCAATCACAAAAGAGGAGCTCCAGCATAAGATACTTATGAACACTTTGGATTTTGTTGAGATTAGAGAAGTTGAAGAACAAATTGAGTATCTGGAAAAGTTGGTGCCAGACTGGATCTGCAAGAAATTGGTTGCTACTGGAGATACTGTGTACTGTATCAATAAAGTGTCAGATTTGGGCTCAGTACGATCAAGGCTTTCCAGCAACGAGACTGTTTGA 1662 0.4025 MELNACEELAKIASDFKCEKVLKTVDESIVCPTPQKNKEPLTVKSREGQTNLPEKYSTLADLFGHMSCSLRLLHLCKKTPIFQNVCRQVEVLSKRKFSHAHLAQMKYILPKSVCIDKVLVHDKKSLCMVPDMKITLKFEVVKDCSGDSADLALRRYFKSKLIDFFDMHPEVADIPEAPLPEPFGKISCRSNCKDSHVEEFTGQSPHVNSSTELFSISNQTEMLPEQLQLYPSFSRHFSRKNNTDQAEKAQCFLPTKTSPSSHAFDFLDNEESEKTLQKECVPLYDDVANPIMERGHQKESFSMSFEPSVINTPVHMIHPPHSVTCSDSESPYLKNISCAADSFIAETPAQSAPARLLPISDVKLQDMPTQKSTSSYKPAKRVLDFSLMEDNDGLGIEMDKLESIRALHEVDSFPESSRGCSEDCNSFGSVSAPQEAEESLGYASEKITQKQADLDTQHKKPSPLLNLVNVIHSIFQSVQRIPITKEELQHKILMNTLDFVEIREVEEQIEYLEKLVPDWICKKLVATGDTVYCINKVSDLGSVRSRLSSNETV* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1695 553 CDD Cdt1_m 34 186 IPR014939 -
Gso16g1695 553 Pfam DNA replication factor CDT1 like 52 115 IPR014939 -
Gso16g1695 553 PANTHER DNA REPLICATION FACTOR CDT1 8 549 IPR045173 GO:0003677|GO:0030174|GO:0071163
Gso16g1695 553 SMART CDT1_2 52 181 IPR014939 -
Gso16g1695 553 SUPERFAMILY "Winged helix" DNA-binding domain 42 183 IPR036390 -
Gso16g1695 553 Pfam DNA replication factor Cdt1 C-terminal domain 451 520 IPR032054 -
Gso16g1695 553 PANTHER EXPRESSED PROTEIN 8 549 - -
Gso16g1695 553 Gene3D - 453 552 IPR038090 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1695 Gso-Chr16 37558680 37563615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1695 464 547 Core DNA Replication Machinery Family AT2G31270 46.429 1.22e-17 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1695 K10727 - gmx:102670055 1094.34