Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1691 ATGGCTTGGGGATCACGTTCCTCTTCCTCTTCCTCCAATTACCATGTGTTCCTCAGCTTCAGGGGTGAAGACACACGTAGTGCTTTTACTGGCCATCTCTACAACACTCTTCAGAGCAAGGGAATCCACACTTTCATTGATGATGAGAAACTTCAAAGAGGGGAGCAAATAACACCAGCACTTATGAAGGCAATTCAAGAGTCCAGAGTTGCCATCACTGTGCTCTCTGAACACTATGCTTCTTCTTCGTTTTGTTTAGATGAACTTGCAACCATCCTTGACCAGAGGAAACGGTTGTTAGTTATACCGGTCTTTTATAAGGTGGATCCTTCTGATGTGAGACACCAGAAAGGTAGTTATGGAGAAGCATTGGCAAAGCTTGAGACGAGGTACCAGCATGACCCGGAGAAGTTGCAAAAATGGAAGATGGCTCTGAAGCAAGTAGCTGACTTGTCTGGCTATCATTTCAAAGAGGGAGATGGATATGAATTCAATTTTATTGAGAAGATTGTTGAGCAGGTATCTAGGGAGATTAATCCTCGTACTTTACATGTTGCGGATTACCGAGTTGGACTAGAGTCGCGAGTGCTAGATGTAAGGAGACTTTTGGATGCTGGATCTGATGATGGTGTCCACATGATAGGGATTCATGGAATGGGCGGGGTAGGAAAATCAACACTTGCTCGAGCTGTTTATAATGAATTGATAATTGCTGAGAAGTTTGATGGTTTGTGTTTTCTTGCAAATGTGAGGGAAAACTCAAACACACACCGGTTAGAACACCTCCAAGAAAAGCTGCTTTTAGAAATACTCGGAGAGAAGAACATCAGCTTAACAAGTGAGAAAGAAGGAATTCCAATCATACAGTCTAGGCTCAAGGGAAAGAAGGTTCTCTTGATTCTAGATGATGTTAACACACATGAGCAATTACAAGCAATTGGAAGACGTGATTGGTTTGGTCCCGGCAGCAAAATCATCATCACAACTCGGGACAAACAATTGCTAGCATCTCATGAAGTTAATAAAACATATGAGATGAAGGAATTAAATCAGAAAGATGCTCTTCAGTTGCTTACATGGAAAGCTTTTAAGAAGGAAAAAGCTTATCCAACTTACGTGGAGGTCTTGCATCTTGCACTAACTTATGCTTCTGGTCATCCATTGACGTTGGAAGTAATAGGTTCCCACTTGGTTGGAAAAAGTATAGAAGAATGGGAATCTGCCATCAAAAAATATGAAAGAACTCCCAAGAAGGAAATTTTTGATAAACTTAAAGTAAGCTTTGATGCTTTGGAGGAAGTGTTGGTTAATTTTGAAAATCGAGATAATCCTGGATAA 1338 0.4096 MAWGSRSSSSSSNYHVFLSFRGEDTRSAFTGHLYNTLQSKGIHTFIDDEKLQRGEQITPALMKAIQESRVAITVLSEHYASSSFCLDELATILDQRKRLLVIPVFYKVDPSDVRHQKGSYGEALAKLETRYQHDPEKLQKWKMALKQVADLSGYHFKEGDGYEFNFIEKIVEQVSREINPRTLHVADYRVGLESRVLDVRRLLDAGSDDGVHMIGIHGMGGVGKSTLARAVYNELIIAEKFDGLCFLANVRENSNTHRLEHLQEKLLLEILGEKNISLTSEKEGIPIIQSRLKGKKVLLILDDVNTHEQLQAIGRRDWFGPGSKIIITTRDKQLLASHEVNKTYEMKELNQKDALQLLTWKAFKKEKAYPTYVEVLHLALTYASGHPLTLEVIGSHLVGKSIEEWESAIKKYERTPKKEIFDKLKVSFDALEEVLVNFENRDNPG* 446
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1691 445 Pfam TIR domain 13 179 IPR000157 GO:0007165
Gso16g1691 445 Gene3D - 6 175 IPR035897 -
Gso16g1691 445 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 433 IPR044974 GO:0006952
Gso16g1691 445 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 182 434 IPR027417 -
Gso16g1691 445 Pfam NB-ARC domain 199 423 IPR002182 GO:0043531
Gso16g1691 445 Gene3D - 176 344 IPR027417 -
Gso16g1691 445 PRINTS Disease resistance protein signature 213 228 - -
Gso16g1691 445 PRINTS Disease resistance protein signature 291 305 - -
Gso16g1691 445 PRINTS Disease resistance protein signature 383 397 - -
Gso16g1691 445 PANTHER DISEASE RESISTANCE PROTEIN (TIR-NBS-LRR CLASS) 16 433 - -
Gso16g1691 445 Gene3D - 348 440 IPR042197 -
Gso16g1691 445 ProSiteProfiles TIR domain profile. 12 178 IPR000157 GO:0007165
Gso16g1691 445 SMART till_3 13 151 IPR000157 GO:0007165
Gso16g1691 445 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 154 IPR035897 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gso16g1691 Gso-Chr16 37513477 37515167 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1691 189 433 WRKY Transcription Factor Family AT5G45050 34.263 9.55e-36 139
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1691 - - gmx:100499654 717.227