Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1686 ATGAGAGAAAATATTTCAGAATCATGGCTAGTTATGATCACTGTGATATTGGCCACAGCAATATTTGCAAAACTATTTCAATTCAAGTTAAGGAAGGAAGATAAAAGCAAATGCAGATTACCACCAGGAAGGAGAGGCTGGCCTTTGATTGGTGACAGCATCAATTGGTACAATGCTGTTGCAAGTTCTCATCCTCCTCAGTTTGTTGAAGAAATGGTGAAAAGGTATGGTAAGATATTTTCTTGCAGCCTATTTGGAAAATGGGCAGTGGTGTCTGCAGATCCAAGCTTCAACCGGTTTGTGATGCAAAACGAAGGCAAATTATTTAAGTCAAGTTACCCAAAATCTTTCAGAGATTTGGTTGGTAAAAATGGTGTGATCACAGTGCAAGGAGAGCAACAAAGGAAGCTACATGGAATTGCCTCCAACATGATGCGCCTAGAGAAGCTTAAGTTCCATTTCTTGAATGATGTACAAAAGGTCATGCTCCAAACTTTGAGCAATTTTAACAACAACCAAGTCATTCTTCTCCAGGATGTTTGTAGGAAGGTTGCTATACATTTAATGGTTAATCAACTTTTGGGGGTTTCAAGTGAGTCTCAAGTTAATGAAATGGCTCAGCTGTTTTCTGGCTTTGTTGATGGTTGTTTATCCATTCCCATCAACATCCCTGGCTATGCATACCACACTGCTATGAAGGCCAGGGAGAAAATCATAAGCAAGATAAACAGGACCATAGAGGTACACAGACAAAATGGTGCTTCTATTGAAGGTAATGGTGTACTTGGAAGATTATTAGAGGAAGAAAGCTTGCCTGATGATGCTGTTGCAGACTTCATTATCAATCTTCTCTTTGCGGGAAATGAAACAACCACCAAAACAATGCTCTTTGCAGTCTATTTCCTTACTCAATGTCCTAGAGCCATGAAGCAACTGCTGGATGAACATGATTCTCTGAGGAGTAATTCTGGAGATAAATTTCTTACATGGCAGGATTATAAAGCAATGTCATTCACTCAATGTGTTATTGATGAAACACTAAGACTTGGGGGTATTGCAATTTGGTTAATGAGAGAAGCAAAAGAAGACGTTCAGTACCAAGATTTTGTTATTCCCAAAGGGTGCTTTGTGGTTCCATTTCTTTCAGCAGTCCATTTAGATGAGAATGTATACAGTGGAGCTCTAAATTTTAATCCTTGGAGATGGATGGAACCTGAGAACGAGGAAAAGAGAAATTGGAGAACTAGTCCATTCTATGCACCCTTTGGAGGAGGTGCTAGATTCTGTCCAGGAACAGAGTTGGCTCGCCTCCAAATTGCTTTTTTTCTTCATTACTTCGTAACTACCTATAGATGGACACAAATCAAGGAAGATAGGATGTCCTTCTTTCCCTCTGCTCGATTGGTGAATGGTTTTGAAATTCGTCTGACGAGAAGACATGATAATGAAACAGATTAA 1458 0.3951 MRENISESWLVMITVILATAIFAKLFQFKLRKEDKSKCRLPPGRRGWPLIGDSINWYNAVASSHPPQFVEEMVKRYGKIFSCSLFGKWAVVSADPSFNRFVMQNEGKLFKSSYPKSFRDLVGKNGVITVQGEQQRKLHGIASNMMRLEKLKFHFLNDVQKVMLQTLSNFNNNQVILLQDVCRKVAIHLMVNQLLGVSSESQVNEMAQLFSGFVDGCLSIPINIPGYAYHTAMKAREKIISKINRTIEVHRQNGASIEGNGVLGRLLEEESLPDDAVADFIINLLFAGNETTTKTMLFAVYFLTQCPRAMKQLLDEHDSLRSNSGDKFLTWQDYKAMSFTQCVIDETLRLGGIAIWLMREAKEDVQYQDFVIPKGCFVVPFLSAVHLDENVYSGALNFNPWRWMEPENEEKRNWRTSPFYAPFGGGARFCPGTELARLQIAFFLHYFVTTYRWTQIKEDRMSFFPSARLVNGFEIRLTRRHDNETD* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1686 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Gso16g1686 485 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1686 485 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1686 485 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1686 485 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1686 485 PANTHER CYTOCHROME P450 26 2 477 - -
Gso16g1686 485 Pfam Cytochrome P450 41 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1686 485 Gene3D Cytochrome P450 30 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1686 485 PRINTS E-class P450 group IV signature 67 90 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1686 485 PRINTS E-class P450 group IV signature 277 303 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1686 485 PRINTS E-class P450 group IV signature 336 352 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1686 485 PRINTS E-class P450 group IV signature 385 403 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1686 485 PRINTS E-class P450 group IV signature 413 429 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1686 485 PRINTS E-class P450 group IV signature 429 447 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1686 485 PANTHER CYTOCHROME P450 SUPERFAMILY PROTEIN 2 477 - -
Gso16g1686 485 SUPERFAMILY Cytochrome P450 36 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1686 Gso-Chr16 37470055 37475705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1686 1 482 Cytochrome P450 AT1G73340 71.311 0.0 738
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1686 - - gmx:100806921 988.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1686 16 37470055 37475705 Gso16g1686 16 37470055 37475705 ECH
Gso16g1686 16 37470055 37475705 Gso9g1327 9 36995762 37001078 GST