Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1684 ATGATATTATTCACACACTGGTCATACCTGGTTGGTTCAAAAATCCATGTCAACTTGTTTTGTGCAATTTTATCCACCATCATGAGCTTGGCATTTAAGGTAAGTCTTTTGTGCGTGATCTTGTTTGTGTCATTCAAATTCAACATGGTCTTGTGTATTGAACTTGAGGAATACTATCCAGAAGAAAGAGATGCTTTGATGCTCATAAGGGATTCTTTGAATTCTTCTGTCAATTTGCATGGGAATTGGACAGGCCCTCCTTGTATAGACAATCGTAGTAGATGGATTGGTATCACTTGTTCAAATTGGCATGTTGTTCAAATTGTTCTTGAAGGAGTTGACCTTAGTGGTTATTTACCTCCCACATTCCTTCTAAACATAACTTTCTTGAGCCAACTTGACTTCAGAAACAATGCACTTTCTGGACCACTGCCAAGCCTCAAGAATTTGATGTTTTTGGAACAAGTCCTGTTATCATTCAATCACTTCTCAGGGTCAATTCCGGTGGAGTATGTTGAAATTCCTAGTCTACAAGTGTTGGAGCTGCAAGACAATTACTTAGAGGGTCAAATTCCACCCTTTGACCAATCATCATTGACAAGTTTCAATGTGTCATATAATCATCTGTCAGGGCCTATTCCTGAAACTTCTGTGCTGCAAAGGTTCCCAGAGAGTTCATATGGTAATAATTCAGATCTTTGTGGAGAGCCATTGGATAAGTTATGTCCTATTGAACCTCCTGCCCCATCTCCATCTCCATTCCCAGCACTGAAGCCAAATAAGAGGAGGTTTCAAGCATGGATTGTTGCTTTGATTGGTGGTGCAGCTGCACTGATTCTTCTTTCTCTGATCATTATTATTGCTTTCATGTTTCGTAAAAGACGTACAAATGGAAAAGAATCAATAAGAAATGATTCAACAGAGTATGTTTTTAGGGCATGGGCAAAGAAGATGGTGTCTTATGCTGGGAACAGTGATGTTTCTGGAAGATTAGGGAAATTGGAATTTTCCAACAAGAAATTGCCAGTTTTTGACTTGGATGATTTATTGAGGGCATCAGCAGAAGTGCTAGGAAGAGGGAACCTAGGCATTACATACAAAACAACACTTGAAACAGGAACTGTTGTTGCAGTGAAGAGACTTAACCACATGAATGAACTCAACAAAAAGGAATTTCTCCAGCAGATGCAATTGCTTGGCCAGATGAAGCATGAAAATCTAGTAGAAATAATCTCCTTTTATTATTCAGAGGACCAAAAGTTGATCATATATGAATTTATCTCTGATGGCACTTTGTGTGAACTCCTACATGAGGGTAGAGGAATTGGAAGAATACCACTTGATTGGACCACAAGACTTTCCATCATCAAGGACATAGCAAAGGGTCTTGTTTTCCTTCATGACTCTTTGCCTCAACACAAGGTCCCTCATGCCAACCTCAAATCATCGAATGTCCTAATCCATCAAGATAGTAAAGGTTACCATTCCAAGCTCACAGACTATGGTTTCTTGCCACTACTCTCAGCCAAACAGAATGCAGAAAAGCTAGCCATAAGGAGGTCTCCAGAATTTGTTAAAGGGAAGAAGCTGACACACAAAGCTGATGTCTATTGCTTTGGCATCATTATGCTAGAGATTATAACTGGCAGAATACCTGGTCATATCCTAGGTGAAATTGAAGAAACAACCAATGATCTTTCAGATTGGGTAAGAACTGTGGTGAACAATGATTGGTCCACAGACATATTGGATTTAGAAATACTAGCAGAGAAAGAAGGGCATGATGCAATGTTGAAGTTGACAGAGTTGGCTCTAGAGTGTACAGATATGACACCAGAGAAACGGCCAAAAATGAGTGTAGTATTGGTGAGAATAGAAGAGATAGAGCAAATGAGAAAAGAGAATGACTGA 1911 0.394 MILFTHWSYLVGSKIHVNLFCAILSTIMSLAFKVSLLCVILFVSFKFNMVLCIELEEYYPEERDALMLIRDSLNSSVNLHGNWTGPPCIDNRSRWIGITCSNWHVVQIVLEGVDLSGYLPPTFLLNITFLSQLDFRNNALSGPLPSLKNLMFLEQVLLSFNHFSGSIPVEYVEIPSLQVLELQDNYLEGQIPPFDQSSLTSFNVSYNHLSGPIPETSVLQRFPESSYGNNSDLCGEPLDKLCPIEPPAPSPSPFPALKPNKRRFQAWIVALIGGAAALILLSLIIIIAFMFRKRRTNGKESIRNDSTEYVFRAWAKKMVSYAGNSDVSGRLGKLEFSNKKLPVFDLDDLLRASAEVLGRGNLGITYKTTLETGTVVAVKRLNHMNELNKKEFLQQMQLLGQMKHENLVEIISFYYSEDQKLIIYEFISDGTLCELLHEGRGIGRIPLDWTTRLSIIKDIAKGLVFLHDSLPQHKVPHANLKSSNVLIHQDSKGYHSKLTDYGFLPLLSAKQNAEKLAIRRSPEFVKGKKLTHKADVYCFGIIMLEIITGRIPGHILGEIEETTNDLSDWVRTVVNNDWSTDILDLEILAEKEGHDAMLKLTELALECTDMTPEKRPKMSVVLVRIEEIEQMRKEND* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1684 636 ProSiteProfiles Protein kinase domain profile. 351 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1684 636 SUPERFAMILY L domain-like 59 222 - -
Gso16g1684 636 SUPERFAMILY Protein kinase-like (PK-like) 355 625 IPR011009 -
Gso16g1684 636 Gene3D Transferase(Phosphotransferase) domain 1 427 636 - -
Gso16g1684 636 Gene3D Phosphorylase Kinase; domain 1 320 426 - -
Gso16g1684 636 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 37 630 - -
Gso16g1684 636 PANTHER POLLEN RECEPTOR-LIKE KINASE 4 37 630 - -
Gso16g1684 636 Gene3D Ribonuclease Inhibitor 59 244 IPR032675 -
Gso16g1684 636 Pfam Leucine rich repeat N-terminal domain 61 101 IPR013210 -
Gso16g1684 636 Pfam Protein kinase domain 354 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1684 Gso-Chr16 37455803 37458332 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1684 62 628 Receptor kinase-like Gene Family AT2G36570 35.387 2.00e-104 329
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso16g1684 Pkinase 3.2e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1684 - - gmx:102668068 1232.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1684 16 37455803 37458332 Gso16g1684 16 37455803 37458332 ECH
Gso16g1684 16 37455803 37458332 Gso9g1325 9 36977644 36980219 GST