Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1662 ATGTTGTGCAAACCACCTTTGAAGTGTTTGAAGATTGTGATCATGGCTAATTTGCTGACAATGTTTTTTGTTATGGAAATGATAGTAGTGAGTGGTTTCAGTTTTGGAGCAAGTGGCTTGAGCATGAATTACTACTTGTTGAGTTGCCCTATTGCTGAACCTGTTGTTAAGAACACTGTCAACACAGCTCTGCAGGATGATCCCACCCTAGCAGCAGGTCTTGTTAGAATGCACTTCCATGACTGTTTCATAGAGGGATGTGATGGTTCAGTTCTGATTGACTCCACTAAGGACAACACAGCAGAAAAGGACTCACCAGCAAACTTGAGCTTGAGAGGCTATGAAGTCATAGATGACATCAAGGAAGAGCTTGAAAAACAATGCCCGGGAGTGGTTTCATGCGCTGATATTGTCGCTATGGCTGCTAGAGATGCAGTTTTCTTTGCAGGGGGTCCTGTATATGACATACCAAAAGGAAGGAAGGATGGAACAAGGTCCAAAATTGAGGATACTATCAATCTACCTGCACCCATTTTCAATGCTTCTGAGCTCATCAAGATGTTCGGACAACGTGGGTTTTCTACAAGAGACATGGTGGCTCTATCAGGAGCTCACACATTAGGAGTGGCAAGGTGTTCTTCATTCAAGAACAGACTGACCCAAGTGGACTCAGAGTTTGCGAAGACACTCTCCAAGACATGCAGTGCGGGTGACACTGCTGAGCAACCCTTTGACTCCACGAGGAGCGATTTTGACAACCACTACTTCAACGCTTTGGTCTCAAACAACGGGGTTCTCACATCGGACCAAACGTTGTACAACAGCCCACAAACCAGGAACATTGTGAACGCTTATGCAATGAATCAAGCCTTGTTTTTCTTGGATTTCCAACAGGCAATGGTGAAGATGAGCATGCTCGATGCCAAACAAGGGTCCAAGGGGGAAGTACGAAAAAATTGTCATCAAATAAATTAA 975 0.4441 MLCKPPLKCLKIVIMANLLTMFFVMEMIVVSGFSFGASGLSMNYYLLSCPIAEPVVKNTVNTALQDDPTLAAGLVRMHFHDCFIEGCDGSVLIDSTKDNTAEKDSPANLSLRGYEVIDDIKEELEKQCPGVVSCADIVAMAARDAVFFAGGPVYDIPKGRKDGTRSKIEDTINLPAPIFNASELIKMFGQRGFSTRDMVALSGAHTLGVARCSSFKNRLTQVDSEFAKTLSKTCSAGDTAEQPFDSTRSDFDNHYFNALVSNNGVLTSDQTLYNSPQTRNIVNAYAMNQALFFLDFQQAMVKMSMLDAKQGSKGEVRKNCHQIN* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1662 324 Pfam Peroxidase 56 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 PRINTS Haem peroxidase superfamily signature 132 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 PRINTS Haem peroxidase superfamily signature 150 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Gso16g1662 324 Gene3D Peroxidase, domain 2 175 303 - -
Gso16g1662 324 Gene3D - 43 324 - -
Gso16g1662 324 PANTHER PEROXIDASE 47 29 322 - -
Gso16g1662 324 CDD secretory_peroxidase 39 323 IPR033905 GO:0004601|GO:0042744
Gso16g1662 324 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
Gso16g1662 324 ProSiteProfiles Plant heme peroxidase family profile. 39 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 PANTHER PEROXIDASE 25-RELATED 29 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 SUPERFAMILY Heme-dependent peroxidases 39 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 PRINTS Plant peroxidase signature 112 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 PRINTS Plant peroxidase signature 131 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 PRINTS Plant peroxidase signature 150 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1662 324 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1662 Gso-Chr16 37252918 37256628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1662 13 324 Peroxidase AT4G33420 73.101 7.02e-173 482
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1662 K00430 - gmx:100796105 647.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1662 16 37252918 37256628 Gso9g1293 9 36510065 36513396 GST