Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1655 ATGGAGGTTCCATCACTTTGTGCTAGTGGCTGTGGCTTCTACGGTTCTTCTGCCAACAAGAACCTTTGTTCAAAGTGTTACAAAGATTATCTCAAAGTCACCAAATCAAATGAGTGTGAAACCAAGAACTTGAATGACCAAGTTTTTGTTCTTGATCAGTCATCAACTTCTGAAGATTCTAACACTGATGCTATGGTTGATGTTACTCTCACCGACGCTGAGGGAATGAACAACAAGCGAAAGAGGTGCAAGTGCTGCAACAAAAAGGTTGGGCTATTAGGGTTTGGATGCCGTTGTGGGGATGTGTTTTGTGGAACACATAGATACCCGGAGAAGCATGCATGCAAAGTGGATTTAAAGGAAATTGGTCGTCAAGGTTTGGTTAAACAAAATCCTGTATGTATCGGTGATAAGTTAGAACATAAGATTTAA 432 0.4074 MEVPSLCASGCGFYGSSANKNLCSKCYKDYLKVTKSNECETKNLNDQVFVLDQSSTSEDSNTDAMVDVTLTDAEGMNNKRKRCKCCNKKVGLLGFGCRCGDVFCGTHRYPEKHACKVDLKEIGRQGLVKQNPVCIGDKLEHKI* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1655 143 ProSiteProfiles Zinc finger A20-type profile. 1 35 IPR002653 GO:0003677|GO:0008270
Gso16g1655 143 Pfam A20-like zinc finger 5 28 IPR002653 GO:0003677|GO:0008270
Gso16g1655 143 SUPERFAMILY AN1-like Zinc finger 73 137 IPR035896 -
Gso16g1655 143 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 55 - -
Gso16g1655 143 PANTHER ZINC FINGER A20 AND AN1 DOMAIN-CONTAINING STRESS-ASSOCIATED PROTEIN 8-RELATED 4 143 - -
Gso16g1655 143 Gene3D - 58 136 IPR035896 -
Gso16g1655 143 Gene3D - 1 57 - -
Gso16g1655 143 ProSiteProfiles Zinc finger AN1-type profile. 77 123 IPR000058 GO:0008270
Gso16g1655 143 PANTHER AN1-TYPE ZINC FINGER PROTEIN 4 143 - -
Gso16g1655 143 SMART A20_3 4 28 IPR002653 GO:0003677|GO:0008270
Gso16g1655 143 SMART AN1_Zf_4 83 120 IPR000058 GO:0008270
Gso16g1655 143 Pfam AN1-like Zinc finger 83 117 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1655 Gso-Chr16 37208053 37208720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1655 6 140 C2H2 Transcription Factor Family AT3G52800 34.839 1.13e-24 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1655 - - gmx:102663114 297.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1655 16 37208053 37208720 Gso16g1655 16 37208053 37208720 ECH