Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1644 ATGGCTTCCCTTGCAGCATCCACTGCTGCTGCTTCCCTTGGCATGTCAGAAATGCTTGGAAACCCCATCAACCTCAGTGGTGCCACAAGGCCAGCTCCATCTGCCTCTAGCCCTGCCTCCTTCAAGACTGTGGCTCTTTTCTCCAAAAAGAAGGCTGCACCTCCAAAAAAAGCTGCAGCTGCTGCTCCTGCCAATGATGAGCTTGCCAAGTGGTATGGTCCTGACAGAAGGATCTTCTTGCCTGAGGGTCTCTTGGACCGATCTGAGATCCCAGAGTACTTGACCGGAGAAGTCCCCGGAGACTATGGTTATGACCCATTTGGTCTTAGCAAGAAGCCAGAAGATTTTTCCAAATATCAGGCATTTGAATTGATTCACGCCAGATGGGCAATGCTTGGTGCTGCTGGATTCATCATTCCCGAGGCCTTCAACAAATATGGAGCAAACTGCGGTCCTGAGGCTGTTTGGTTCAAGACTGGAGCTCTGCTTCTTGATGGGGGTACCTTGAACTACTTCGGGAAACCCATCCCCATCAATCTTATTGTGGCTGTCATTGCTGAGATTGTTCTTGTGGGAGGTGCAGAGTACTACAGAATTATTAATGGCCTGAATTTCGAAGACAAACTTCATCCAGGTGGTCCATTTGACCCATTGGGGCTTGCAAATGATCCAGACCAAGCTGCACTGCTAAAGGTGAAGGAAATTAAAAATGGAAGACTTGCTATGTTTGCCATGCTTGGTTTCTACTTCCAAGCTTATGTCACTGGAGAAGGTCCTGTTGAGAACCTTGCAAAACATCTCAGTGACCCTTTTGGCAACAACTTGCTCACTGTCATTTCTGGATCTGCTGAGAGAGCTCCAACTCTCTAA 870 0.4816 MASLAASTAAASLGMSEMLGNPINLSGATRPAPSASSPASFKTVALFSKKKAAPPKKAAAAAPANDELAKWYGPDRRIFLPEGLLDRSEIPEYLTGEVPGDYGYDPFGLSKKPEDFSKYQAFELIHARWAMLGAAGFIIPEAFNKYGANCGPEAVWFKTGALLLDGGTLNYFGKPIPINLIVAVIAEIVLVGGAEYYRIINGLNFEDKLHPGGPFDPLGLANDPDQAALLKVKEIKNGRLAMFAMLGFYFQAYVTGEGPVENLAKHLSDPFGNNLLTVISGSAERAPTL* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1644 289 Pfam Chlorophyll A-B binding protein 91 252 IPR022796 -
Gso16g1644 289 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 289 IPR001344 GO:0009765|GO:0016020
Gso16g1644 289 SUPERFAMILY Chlorophyll a-b binding protein 70 279 - -
Gso16g1644 289 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 289 - -
Gso16g1644 289 Gene3D Chlorophyll a/b binding protein domain 78 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1644 Gso-Chr16 37140529 37143374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1644 11 289 Chloroplast and Mitochondria Gene Families AT4G10340 81.786 1.18e-152 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1644 K08916 - gmx:100789786 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1644 16 37140529 37143374 Gso9g1273 9 36296807 36299580 GST
Gso16g1644 16 37140529 37143374 Gso10g1611 10 42631447 42634333 PCT
Gso10g1611 10 42631447 42634333 Gso16g1644 16 37140529 37143374 PCT