Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1635 ATGAATTCAGGTAGTACGGAGGGGAAGAAGAAGAGGGGCAGGCCTAGGAAGTATGGACCGGATGGCAAGGTGGCGCTGTCACCGATGCCGATATCGGCGTCGATTCCGTTCACCGGAGACTTCTCAGCCTGGAAAAGGGGCAGAGGGAAGCCACTTGAATCAATCAAGAAGACTTTTAAGTTTTATGAAGCTGGAGGTGCAGGATCTGGTGATGGAATTGCATACTCGGTTGGTGCCAATTTCACACCTCACATCCTTACAGTAAATGATGGCGAGGACGTTACTATGAAGATTATGTCCTTCTCTCAACAAGGATGTCGAGCAATTTGCATTCTGTCTGCAAATGGCACAATTTCAAATGTTACACTACGCCAACCAACTTCTTCTGGTGGTACTTTAACATATGAGGGGCGGTTTGAAATTCTTTCCTTGTCTGGTTCATATATAACAACTGAGAATGGATTAACAAAGAGCAGATCTGGTGGTATGAGCATCTCTTTGGCCGGTCCAGATGGTCGAGTAATGGGGGGTGGATTGGCTGGTTTGCTGGTAGCTGCAGGTCCTGTGCAGGTTGTTGTGGCTAGTTTTCTTCCTGGTCATCAGCTGGAGCAGCAGAAACCGAAGAAGCCAAGGGTGGAGCATATAATATCAATGGCTGCCCCTATGCATGTCAACCCTACTTCAGCTGCTGAAGAAATAAGAATTGGTCTTGGTGGAGTAAAGCCAATCATGACACCAGCTGCTTTTCAAGTGGACCACATTTTTGGCAATGGCCAAAGCTCTGGGAACTCAGCTTCTGATGATTCAGCCTCTTTCCCTGAAAATGAGTCCAACCCCAGCCATGCAGATGCTGGAGTTGCATGCTAA 867 0.4752 MNSGSTEGKKKRGRPRKYGPDGKVALSPMPISASIPFTGDFSAWKRGRGKPLESIKKTFKFYEAGGAGSGDGIAYSVGANFTPHILTVNDGEDVTMKIMSFSQQGCRAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSYITTENGLTKSRSGGMSISLAGPDGRVMGGGLAGLLVAAGPVQVVVASFLPGHQLEQQKPKKPRVEHIISMAAPMHVNPTSAAEEIRIGLGGVKPIMTPAAFQVDHIFGNGQSSGNSASDDSASFPENESNPSHADAGVAC* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1635 288 MobiDBLite consensus disorder prediction 254 278 - -
Gso16g1635 288 MobiDBLite consensus disorder prediction 254 288 - -
Gso16g1635 288 MobiDBLite consensus disorder prediction 1 25 - -
Gso16g1635 288 ProSiteProfiles PPC domain profile profile. 78 222 IPR005175 -
Gso16g1635 288 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 3 4 276 - -
Gso16g1635 288 SUPERFAMILY AF0104/ALDC/Ptd012-like 80 200 - -
Gso16g1635 288 CDD DUF296 82 196 IPR005175 -
Gso16g1635 288 Pfam Plants and Prokaryotes Conserved (PCC) domain 83 196 IPR005175 -
Gso16g1635 288 Gene3D - 83 216 - -
Gso16g1635 288 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 4 276 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1635 Gso-Chr16 37025810 37033169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1635 2 212 AT-hook Motif Nuclear Localized (AHL) Family AT5G62260 62.946 4.29e-88 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1635 - - gmx:100803208 545.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1635 16 37025810 37033169 Gso9g1265 9 36162254 36168090 GST
Gso16g1635 16 37025810 37033169 Gso10g1616 10 42699229 42706469 PCT
Gso10g1616 10 42699229 42706469 Gso16g1635 16 37025810 37033169 PCT