Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1622 ATGATAAAGGTCGTTCTTTTTTTGTTCTGCTTTGCCTCTGCACTGACCCTTTCAGTATCGGAGTCCAAATCTGCTTCTGTGCAACCTCATGCAGCTGAATCTTTCTCTGTTGGATATATTCAGATGAAGACTGCAGCGAACTGTTCTTACCTGGTAGTTATATCTACGAGTTGTTCATCGCCCAAGTTCACTACGGATAAGATCGGTATTACGTTTGGGGATGCTTATGGCAACCAGGTATATGAACCAAGACTGGATGATCCAATTTCAAGGATATTTGAACAGTGTTCTTCAGATACATTTCAGATAGATGGTGCATGTGCATCTCCAATTTGCTATGTGTACCTATATAGATCTGGGGCAGAGGAAGGTTGGGAGCCTGAGAGTGTGAAAATCTATGGCTATAACTCAGAGCCTATTACTTTCGATTTCAACACCTCCATCCCCAATGGCACGTGGTATGGGTATAATCTGTGCGAGACTCCTTCTTCTTCTTCACACCAACTATTCCCTCAGAAATGGCTCATGAGTTTGGTTCTAGGCTTTGTTCTTAGTTTTTTGCTGTAA 567 0.4233 MIKVVLFLFCFASALTLSVSESKSASVQPHAAESFSVGYIQMKTAANCSYLVVISTSCSSPKFTTDKIGITFGDAYGNQVYEPRLDDPISRIFEQCSSDTFQIDGACASPICYVYLYRSGAEEGWEPESVKIYGYNSEPITFDFNTSIPNGTWYGYNLCETPSSSSHQLFPQKWLMSLVLGFVLSFLL* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1622 188 CDD PLAT 48 159 - -
Gso16g1622 188 Gene3D PLAT/LH2 domain 45 155 - -
Gso16g1622 188 Pfam Embryo-specific protein 3, (ATS3) 41 159 IPR010417 -
Gso16g1622 188 PANTHER EMBRYO-SPECIFIC PROTEIN 2 188 - -
Gso16g1622 188 SUPERFAMILY Lipase/lipooxygenase domain (PLAT/LH2 domain) 46 156 IPR036392 GO:0005515
Gso16g1622 188 PANTHER - 2 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1622 Gso-Chr16 36880212 36882095 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1622 - - gmx:100499779 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso20g1188 20 41739921 41743576 Gso16g1622 16 36880212 36882095 PCT
Gso10g2197 10 49027721 49029144 Gso16g1622 16 36880212 36882095 PCT