Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1620 ATGATAATAGGATCGGCAAAGGCGGGTTTGGAGAAGTTTACAAGTGGTTATATGTCTCCAGAATATGCAATGCTTGGACAATTTTCAGAAAAATCAGATGTTTTTAGTTTTGGAGTGATGGTTCTAGAGATTATTTCAGGAAAAAAGAATTCAGGCTTATATGAACCACATCGTGTTGCTGAGGGCCTCCTGAGTTGTGTTTGGAGACAATGGAGGGATCAAAAACCGTTAAGCATACTAGACGCAAGTATTAATGAAAATTATTCTGAAATTGAAGTTATTAAATGCATTCAAATTGGTTTATTATGTGTTCAACAAAATCCTGATGACAGACCCACAATGGTTGCAATTGTTTCATATCTTAGTAGTCATTTAATTGAATTGCCAAGTCCTCAAGAACCTGCCCTTTTCTTACATAGTAGAAAGGATCCTAAAGCATTTGCACAAGAATCAAGTTCAAGTCACAATATCAATGCTTCCACTTCATTGTCTATTAATGAAATGTCTATAAGTCAATTTCTTCCTCGATAG 531 0.3522 MIIGSAKAGLEKFTSGYMSPEYAMLGQFSEKSDVFSFGVMVLEIISGKKNSGLYEPHRVAEGLLSCVWRQWRDQKPLSILDASINENYSEIEVIKCIQIGLLCVQQNPDDRPTMVAIVSYLSSHLIELPSPQEPALFLHSRKDPKAFAQESSSSHNINASTSLSINEMSISQFLPR* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1620 176 Gene3D Transferase(Phosphotransferase) domain 1 4 130 - -
Gso16g1620 176 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 14 167 - -
Gso16g1620 176 SUPERFAMILY Protein kinase-like (PK-like) 12 153 IPR011009 -
Gso16g1620 176 Pfam Protein tyrosine and serine/threonine kinase 11 121 IPR001245 GO:0004672|GO:0006468
Gso16g1620 176 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1620 Gso-Chr16 36862569 36864483 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1620 14 176 Receptor kinase-like Gene Family AT3G45860 49.390 4.68e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso16g1620 PK_Tyr_Ser-Thr 2.9e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1620 - - gmx:100798426 319.701