Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1618 ATGGTTCTCCAAACTTCGTCTCTAGGGTTTATAGTGAGGAGGCACCCACCAGAGCTAGTAGCCCCAGCCAACCCCACTCCCCGTGAAGTTAAGCTATTATCTGACATAGATGACCAAAATGGCCTTCGTTACCAACTTCCACTGGTGCTATTCTTTCCTTACCAGCCTTCAATGGAAGGGAAAGACCCTGTTGAAGTCATTAGAGAAGCACTATCCAAAACACTTGTGTTTTACTATCCCTTCGCGGGAAGGCTTAGGGAGGGTCCTGATGGCAAACTAATGGTGGATTGTAATGGAGAAGGTGCCATGTTCATTGAGGCTGATGCAGATGTGACAATTGAGCAGTTTGGTAATAATTTTATGCCTCCATTCCCTTGCTTTGATGAGCTCCTCTACAATGTTCCTGGTTCAGATGGAATGATTGACACCCCACTGCTGCTTATACAGGTAACACGTCTCAAGTGTGGTGGTTTCATCTTTGCACTCCGAATGAATCATACTATATGTGATGGAAGTGGAATTTGCCAATTTCTGAAGGCGTTATCAGAGATGGCACACGGTGCACCAAAGCCTTCTATTCTCCCTGGCTGGCACAGGGAGATTCTATGTGCTAGAGAACCACCAAGAATCACATGCATCCATCAAGAATACCAACAACTACCACCTGATTCAAGAAGCATCTTCATATCCCATCAACTTACACTGCTCGAAGTCGAAGGACCCACCGTGTTGTCCAAATTGCGTTAG 747 0.4578 MVLQTSSLGFIVRRHPPELVAPANPTPREVKLLSDIDDQNGLRYQLPLVLFFPYQPSMEGKDPVEVIREALSKTLVFYYPFAGRLREGPDGKLMVDCNGEGAMFIEADADVTIEQFGNNFMPPFPCFDELLYNVPGSDGMIDTPLLLIQVTRLKCGGFIFALRMNHTICDGSGICQFLKALSEMAHGAPKPSILPGWHREILCAREPPRITCIHQEYQQLPPDSRSIFISHQLTLLEVEGPTVLSKLR* 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1618 248 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 229 - -
Gso16g1618 248 Gene3D - 11 219 IPR023213 -
Gso16g1618 248 PANTHER ALCOHOL ACYLTRANSFERASE 10 229 - -
Gso16g1618 248 Pfam Transferase family 18 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1618 Gso-Chr16 36846645 36853891 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1618 19 221 Monolignol Biosynthesis Gene Families AT5G48930 37.931 3.00e-31 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1618 K19861 - gmx:100797901 483.796