Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1617 ATGGTTCTCCAAACTTCATCTCTAGGGTTTATAGTGAGGAGGCACCCACCAGAGCTAGTAGCCCCAGCCAACCCCACTCCCCATGAAGTTAAGCTATTATCTGACATAGATGACCAAAATGGCCTTCGTTACCAACTTCCACTGGTGCTATTCTTTCCTTACCAGCCTTCAATGGAAGGGAAAGACCCTGTTGAAGTCATTAGAGAAGCACTATCCAAAACACTTGTGTTTTACTATCCCTTCGCGGGAAGGCTTAGGGAGGGTCCTGATGGCAAACTAATGGTGGATTGTAATGGAGAAGGTGTCATGTTCATTGAGGCTGATGCAGATGTGACAATTGAGCAGTTTGGTAATAATTTTATGCCTCCATTCCCTTGCTTTGATGAGCTCCTCTACAATGTTCCTGGTTCAGATGGAATGATTGACACCCCACTGCTGCTTATACAGGTAACACGTCTCAAGTGTGGTGGTTTCATCTTTGCACTCCGAATGAATCATACTATGTGTGATGGAAGTGGAATTTGCCAATTTCTGAAGGCGTTATCAGAGATAGCACATGGTGCACCAAAGCCTTCTATTCTCCCTGGCTGGCACAGGGAGATTCTATGTGCAAGAGAACCACCAAGAATCACATGCATCCATCAAGAATACCAACAACTACCACCTGATTCAAGAAGCATCTTCATACCCCATCAACGTTCCTTCTTCTTTGGCCCCAAAGAGATAGCTTCACTCCGTGCTCTTCTTCCCCACCACCTTGCCACCAAATCCACCTCCTTTGAAGTCATCACAGCATGCCTCTGGCGCTGCCGGACCGCATCACTAAAATGGCAAAACCCTAATCAAGAGGTTCGCTTGTTGTGCATTGTTAATGCACGCTTTGGAAACTGTAGGTTCAACCCTCCATTGCCTGATGGTTTTTACGGCAACGCTTTCGTGTTTCCGGCGGCGGTTACCACAGTAGGGAAGCTTCTGGGTCGCTCCTTAGGGTATGCAGTGGAGCTAGTGAAGAAGGCAAAGGATGAAGCAGATGAGGAGTATGTGCACTCTGTGGCTGACCTAATGGCTATCAAAGGAAGACCTTGCTTTACTAAGTTAGGGTCTTTTATGGTATCTGATCTCACAAAATCTGGGTTAATAGATGTTAACCTTGGATGGGGTAAGGCTTTGTATTCTGGGGTAGCTAAGGGTGGTCTTGGTGATATTCCTGGGGTGAGCTTCTATGTGCCCTACACCAACTCCAAAGGAGAGAGAGGCAGAGTCATTCCAATTTGCCTTCCTGAAGATGCCATGGAGAGGTTTGAGAAAGAGTTGCATGACACTCTCATGATCAAGAATAACATTCCAATGTTAATGTCCAGTCTCTAA 1368 0.462 MVLQTSSLGFIVRRHPPELVAPANPTPHEVKLLSDIDDQNGLRYQLPLVLFFPYQPSMEGKDPVEVIREALSKTLVFYYPFAGRLREGPDGKLMVDCNGEGVMFIEADADVTIEQFGNNFMPPFPCFDELLYNVPGSDGMIDTPLLLIQVTRLKCGGFIFALRMNHTMCDGSGICQFLKALSEIAHGAPKPSILPGWHREILCAREPPRITCIHQEYQQLPPDSRSIFIPHQRSFFFGPKEIASLRALLPHHLATKSTSFEVITACLWRCRTASLKWQNPNQEVRLLCIVNARFGNCRFNPPLPDGFYGNAFVFPAAVTTVGKLLGRSLGYAVELVKKAKDEADEEYVHSVADLMAIKGRPCFTKLGSFMVSDLTKSGLIDVNLGWGKALYSGVAKGGLGDIPGVSFYVPYTNSKGERGRVIPICLPEDAMERFEKELHDTLMIKNNIPMLMSSL* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1617 455 Gene3D - 11 219 IPR023213 -
Gso16g1617 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 444 - -
Gso16g1617 455 PANTHER ALCOHOL ACYLTRANSFERASE 10 444 - -
Gso16g1617 455 Pfam Transferase family 18 439 - -
Gso16g1617 455 Gene3D - 231 444 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1617 Gso-Chr16 36803727 36806796 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1617 19 438 Monolignol Biosynthesis Gene Families AT5G48930 29.797 2.69e-46 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1617 K19861 K13610 gmx:100795237 938.717