Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1616 ATGGCCAAGACCCTAAAGGGAAACATGGCTTGCTCTCTAACGAGCTATATTCTATTTTTTGCAATGTTGTTCTCAGCAAATGCTCAATTTTCTAAGAAGACTTACCTCATTCAAATGGATAAGTCAACAATGCCAAAAGCCTTCCCCAACCACCTTGAATGGTATTCATCAAAGGTGAAATCAGCACTGTCCACATCTCCAGAAGCTGATATGGACAATGAAGAGAGAATAATCTACACTTATCAGAATGCTTTTCATGGAGTTGCAGCCAAGTTAACTGAAGGAGAAGCTAAGAAGCTAGAGGCTGAAGAAGGTGTTGTGGCCATATTCCCTGATACAAAGTATGAGCTACACACCACAAGAAGTCCAATATTCCTTGGTCTTGAACCAGCAAAAAGCACTAACATGTGGTCAGAGAAGCTAGCTGGCCATGATGTTATAGTGGGAGTGGTAGACACTGGGATTTGGCCAGAGAGTGAAAGCTTCAAAGATGTAGGCATGAGACCAGTACCTGCTCATTGGAAAGGTGCATGTGAGATTGGAACAGGCTTCACAAAAAGTCACTGCAATAAAAAGGTTGTGGGGGCAAGAGTGTTCTACCATGGATATGAAGCAGCAATTGGTAGAATTAATGAGCAAAAAGAGTATAAGTCACCAAGAGATCAAGATGGGCATGGCACTCACACAGCAGCTACAGTTGGAGGCTCTCCTGTGCATGGAGCTAACCTTCTAGGTTATGCTAATGGCACAGCCCGAGGAATGGCTCCAGGTGCAAGGATTGCAGCCTACAAAGTGTGTTGGGTTGGTGGTTGCTTCAGCTCAGATATTGTGTCAGCTATTGATAAAGCTGTGGCTGATGGAGTGAATGTTCTTTCCATCTCTTTGGGTGGTGGAGTCTCCTCTTATTACAGAGATAGTTTATCAGTGGCAGCATTTGGAGCAATGGAGAGGGGTGTTTTTGTTTCATGTTCTGCTGGAAATGCAGGACCTGACCCTGCCAGCCTCACCAATGTGTCACCATGGATCACCACAGTTGGAGCCAGCACAATGGATAGGGATTTTCCAGCGGATGTTAGGCTTGGGAATGGCAAAAAAGTGACTGGAGTTTCACTCTATAAAGGGAAAAATGTGCTATCAATTGAGAAACAATACCCTTTGGTGTACATGGGGAGCAATTCTAGCAGGGTTGATCCAAGATCTATGTGCTTGGAAGGGACCTTGGATCCTAAAGTGGTGTCAGGAAAGATAGTAATTTGTGATAGAGGCCTTAGTCCTAGAGTGCAGAAGGGTAATGTGGTGAGAAGTGCAGGAGGGGTGGGAATGATTCTCACAAACACGGAAGCCAATGGAGAAGAACTGGTTGCAGATTCTCACCTCCTTCCAGCAGTTGCAATAGGAGAGAAAGAAGGAAAAGAGCTCAAAAGTTATGTCCTATCAAGTAAAAGTTCTACTGCAACTCTAGCTTTTAAAGGTACAAGGTTGGGAATCAAACCATCTCCTATAGTGGCAGCATTTTCATCAAGAGGGCCTAATTTTCTCACCCTTGACATTCTGAAGCCTGATTTAGTGGCTCCTGGGGTGAACATTCTTGCTGCTTGGAGTGAGGCCATTGGTCCATCGGGCTTGAAAATAGACAACAGAAAAGTGAAGTTCAATATAGTCTCTGGCACCTCAATGTCATGCCCTCATGTGAGTGGCATAGCAGCTTTGGTCAAGTCTAGGCACCCTGAGTGGAGTCCTGCTGCTATAAAATCTGCTTTGATGACAACAGCTTATGTTCTTGACAACACCAAGAAAACTCTCAGAGATGCCTCAACTGCTAAACCATCAAGTCCTTATGATCATGGTGCTGGACACATTGACCCTATTAGAGCTCTTGACCCTGGTTTGGTCTATGACATTGTGCCACAGGACTACTTTGAATTTCTATGCACTCAGAATCTGACTCCAACACAACTAAAAGTTTTTGCCAAATATTCAAACAGATCTTGTAGACACTCTCTAGCAAGTCCAGGGGACTTGAACTACCCAGCCATATCATCAGTGTTTACCCAGAAAACACCCACTTCATTCCCCAGTCCTGTGATTGTTCACAGAACTGTCACCAATGTTGGCCCTCCTGATTCCAAATACCATGTTGTGGTCTCACCATTCAAAGGTGCTTCTATCAAAGTTGAGCCAGAAACCTTGAATTTTACCGGAAAACACCAGAAGCTGTCTTACAAGATTACCTTCAAGCCAAAGGTTCGGCAAACCTCTCCCGAATTCGGAAGTATGGAATGGAAGGATGGTTTGCACACTGTGAGAAGCCCCATTGTGATAACATGGCTGCCACCACCAATGTGA 2346 0.445 MAKTLKGNMACSLTSYILFFAMLFSANAQFSKKTYLIQMDKSTMPKAFPNHLEWYSSKVKSALSTSPEADMDNEERIIYTYQNAFHGVAAKLTEGEAKKLEAEEGVVAIFPDTKYELHTTRSPIFLGLEPAKSTNMWSEKLAGHDVIVGVVDTGIWPESESFKDVGMRPVPAHWKGACEIGTGFTKSHCNKKVVGARVFYHGYEAAIGRINEQKEYKSPRDQDGHGTHTAATVGGSPVHGANLLGYANGTARGMAPGARIAAYKVCWVGGCFSSDIVSAIDKAVADGVNVLSISLGGGVSSYYRDSLSVAAFGAMERGVFVSCSAGNAGPDPASLTNVSPWITTVGASTMDRDFPADVRLGNGKKVTGVSLYKGKNVLSIEKQYPLVYMGSNSSRVDPRSMCLEGTLDPKVVSGKIVICDRGLSPRVQKGNVVRSAGGVGMILTNTEANGEELVADSHLLPAVAIGEKEGKELKSYVLSSKSSTATLAFKGTRLGIKPSPIVAAFSSRGPNFLTLDILKPDLVAPGVNILAAWSEAIGPSGLKIDNRKVKFNIVSGTSMSCPHVSGIAALVKSRHPEWSPAAIKSALMTTAYVLDNTKKTLRDASTAKPSSPYDHGAGHIDPIRALDPGLVYDIVPQDYFEFLCTQNLTPTQLKVFAKYSNRSCRHSLASPGDLNYPAISSVFTQKTPTSFPSPVIVHRTVTNVGPPDSKYHVVVSPFKGASIKVEPETLNFTGKHQKLSYKITFKPKVRQTSPEFGSMEWKDGLHTVRSPIVITWLPPPM* 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1616 781 Pfam Subtilase family 143 599 IPR000209 GO:0006508|GO:0008236
Gso16g1616 781 Gene3D - 351 495 - -
Gso16g1616 781 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 22 775 - -
Gso16g1616 781 Pfam Peptidase inhibitor I9 34 118 IPR010259 -
Gso16g1616 781 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Gso16g1616 781 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Gso16g1616 781 PRINTS Subtilisin serine protease family (S8) signature 555 571 IPR015500 -
Gso16g1616 781 Gene3D Peptidase S8/S53 domain 145 639 IPR036852 GO:0004252|GO:0006508
Gso16g1616 781 CDD Peptidases_S8_3 115 592 IPR034197 -
Gso16g1616 781 Gene3D - 643 776 - -
Gso16g1616 781 Pfam PA domain 383 473 IPR003137 -
Gso16g1616 781 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 118 IPR037045 -
Gso16g1616 781 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 22 775 IPR045051 -
Gso16g1616 781 SUPERFAMILY Subtilisin-like 118 630 IPR036852 GO:0004252|GO:0006508
Gso16g1616 781 CDD PA_subtilisin_like 357 487 - -
Gso16g1616 781 ProSiteProfiles Serine proteases, subtilase domain profile. 114 626 - -
Gso16g1616 781 Pfam Fibronectin type-III domain 673 774 IPR041469 -
Gso16g1616 781 ProSitePatterns Serine proteases, subtilase family, serine active site. 556 566 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1616 Gso-Chr16 36797286 36799972 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1616 19 779 Subtilisin-like Serine Gene Family AT5G51750 68.394 0.0 1106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1616 - - gmx:100794709 1546.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1616 16 36797286 36799972 Gso9g1241 9 35556729 35559417 GST
Gso16g1616 16 36797286 36799972 Gso20g1222 20 42195070 42197893 PCT
Gso16g1616 16 36797286 36799972 Gso10g2156 10 48602400 48605289 PCT
Gso20g1222 20 42195070 42197893 Gso16g1616 16 36797286 36799972 PCT
Gso10g2156 10 48602400 48605289 Gso16g1616 16 36797286 36799972 PCT