Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1609 ATGATGATAGTTTTCAAACATTCAACCATGATGCCCTTCTTCTCTTTCACACACTACAAATCCTTTTGGAGATCTTCAATTGCATTTGCATTTGCATTTGCATTTTTCTTAACCTTTCTCTTGATTGCAAACTCACTCACTCTCCAAACCCAATCCACTACAATCCCATGCAACAAAGACCCCTACAAGGAACTAAACCTTATCCCCAACCCAAACGGCACCGTCACGCGCCCCAACAAACCCCCCCAGAGCCCGCCCGCACCGGATCCCAACCTCAACACCCTCGTACTCTCCAAAGACCTCTCCATCAACCAATCAAAAAGCACATGGGCGAGGGTCTACCTACCCCGCGTAGCACTGGATCACAGCTCCAAACTCCCGTTATTGGTTTTCTTCCATGGTGGCGGCTTCATTTTCCTCAGTGCGGCCTCAACAATCTTCCACGATTTTTGCTTCAACATGGCAAACGACGTCGTTGCGGTCGTTGCGTCCATCGAATACCGTCTCGCACCGGAACACAGACTCCCCGCGGCGTACGAGGATGCCGTGGAGGCGCTGCAGTGGATCAAAACCAACCGAGATGATTGGCTGACAAACTACGTCGATTACTCCAACGTTTTTCTCATGGGGAGTAGTGCCGGGGGAAACATAGCCTACAACGCGGGTCTACATGCAGCCGCGGTTGATGAAAATCAGATTCCTAAGATCCAAGGGCTTATTTTGGTTCAACCGTTTTTCAGTGGGACCCGCAGGACAGGTTCGGAGCTGAGGTTAGAAAACGAACCGCATTTAGCGCTGTGTGCTAATGACGCGTTGTGGGAGTTGTCGTTACCCGTTGGGGTTGACCGTGATCACGAGTATTGCAATCCAACGGCGGGGAATGGTCCTGCTAGAATGGGAATGATCAAACGGCGTGGATGGTGGGTGCTGGTTACCGGTTGTGGCGGTGATCCACTTGTGGATCGACAGGTGCAGCTTGTGAGGTTGATGCAAAGGAAGGGAGTGAGAGTTGTGGGGCATTTCACACCAGGGGATTATCATGGGGTTCAAGATCGTGATCCATTGAAGGCAAGGGAGCTATATGGGTGGTGA 1092 0.511 MMIVFKHSTMMPFFSFTHYKSFWRSSIAFAFAFAFFLTFLLIANSLTLQTQSTTIPCNKDPYKELNLIPNPNGTVTRPNKPPQSPPAPDPNLNTLVLSKDLSINQSKSTWARVYLPRVALDHSSKLPLLVFFHGGGFIFLSAASTIFHDFCFNMANDVVAVVASIEYRLAPEHRLPAAYEDAVEALQWIKTNRDDWLTNYVDYSNVFLMGSSAGGNIAYNAGLHAAAVDENQIPKIQGLILVQPFFSGTRRTGSELRLENEPHLALCANDALWELSLPVGVDRDHEYCNPTAGNGPARMGMIKRRGWWVLVTGCGGDPLVDRQVQLVRLMQRKGVRVVGHFTPGDYHGVQDRDPLKARELYGW* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1609 363 MobiDBLite consensus disorder prediction 75 89 - -
Gso16g1609 363 PANTHER ARYLACETAMIDE DEACETYLASE 55 361 - -
Gso16g1609 363 Gene3D alpha/beta hydrolase 62 362 IPR029058 -
Gso16g1609 363 Pfam alpha/beta hydrolase fold 129 349 IPR013094 GO:0016787
Gso16g1609 363 PANTHER CARBOXYLESTERASE 120-RELATED 55 361 - -
Gso16g1609 363 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 129 145 IPR002168 GO:0016787
Gso16g1609 363 MobiDBLite consensus disorder prediction 70 89 - -
Gso16g1609 363 SUPERFAMILY alpha/beta-Hydrolases 46 354 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1609 Gso-Chr16 36705109 36706917 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1609 72 339 Carbohydrate Esterase AT5G16080 37.993 1.49e-51 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1609 - - gmx:100792597 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1609 16 36705109 36706917 Gso9g1232 9 35417021 35418640 GST
Gso20g1227 20 42263609 42264778 Gso16g1609 16 36705109 36706917 PCT