Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1608 ATGTCTAAACAACCCATTGATCCCTTTCGCCACATCAACATAGTTCTCAACCCTAACGGAACCCTAAATCGCTTGCGCCATATTCCCAGCACCGCACCCTCTTCCGACCCCACTCTCCCAGTTCTCACCAAAGACATCACCATCAACCAACAAAACAACACATGGCTCCGCTTATTCCTCCCCCGAATAGCACTATCCCCAAACCCTAAGAAGCTACCTCTCATCGTTTTCTTCCACGGCAGCGGCTTCATCGTAACCAGCGCCGCCTCCACTATGTTCCACGACTTCTGCGCCGCCATGTCCGCCGCCGTCCCCGCCGTCGTGGCCTCTGTCGAATACCGCCTCGCGCCGGAGCACCGTCTCCCGGCGGCGTACGACGACGCGGCGGAAGCCTTGGAGTTTATCCGAGACAGCAGCGAGGAAGAAGAATGGTTGACCAAACACGCCGACATGTCTAATTGCTATCTCATGGGGAGCAGTGCGGGGGCCACAATCGCCTACTTCGCGGGTCTACGCGCGACCGACACGGCGAGCGATCTCTCGCCGTTGAAGATCAGAGGGCTGATATTGCGGCAGGTGTTTTTCGGTGGGACCCAGAGGAGCAAATCCGAGGTTAGGCTGGAGAACGACGAGGTTCTTCCGCTGTGTGTGACGGATTTGTTGTGGGAGCTGGCGCTGCCGGTTGGCGTTGACCGTGATCACGAGTATTGCAATCCGAGGGCTGAGAAGTGGGTTGGGAAAATGGGGAAGATGAGGGAGCTAGGGTGGAGGGTGTTGGTGAGTGGGAATGGAGGGGACCCTGTGATTGATCGTGAGAAGGACTTGGTGTTGTTGTTGGAGGAGAAGGGTGTGGTTGTGGTGAGTGATTTTGATGAAGAAGGGTGCCATGGGGTGGAGTTTGGTGATGAATCCAAAGCAAACCAACTCATTCAGGTAGTCAAACGTTTTGTTTCATGA 957 0.5549 MSKQPIDPFRHINIVLNPNGTLNRLRHIPSTAPSSDPTLPVLTKDITINQQNNTWLRLFLPRIALSPNPKKLPLIVFFHGSGFIVTSAASTMFHDFCAAMSAAVPAVVASVEYRLAPEHRLPAAYDDAAEALEFIRDSSEEEEWLTKHADMSNCYLMGSSAGATIAYFAGLRATDTASDLSPLKIRGLILRQVFFGGTQRSKSEVRLENDEVLPLCVTDLLWELALPVGVDRDHEYCNPRAEKWVGKMGKMRELGWRVLVSGNGGDPVIDREKDLVLLLEEKGVVVVSDFDEEGCHGVEFGDESKANQLIQVVKRFVS* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1608 318 PANTHER ARYLACETAMIDE DEACETYLASE 4 317 - -
Gso16g1608 318 Pfam alpha/beta hydrolase fold 75 298 IPR013094 GO:0016787
Gso16g1608 318 Gene3D alpha/beta hydrolase 9 318 IPR029058 -
Gso16g1608 318 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 4 317 - -
Gso16g1608 318 SUPERFAMILY alpha/beta-Hydrolases 15 316 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1608 Gso-Chr16 36700891 36702184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1608 19 239 Carbohydrate Esterase AT5G16080 39.035 6.43e-50 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1608 - - gmx:100779813 627.091
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1608 16 36700891 36702184 Gso16g1608 16 36700891 36702184 ECH
Gso16g1608 16 36700891 36702184 Gso9g1230 9 35382738 35386465 GST
Gso16g1608 16 36700891 36702184 Gso20g1227 20 42263609 42264778 PCT
Gso20g1228 20 42269369 42270706 Gso16g1608 16 36700891 36702184 PCT