Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1603 ATGGGCAAGGAGTGGTATTTTGCTGGAAGATCATCTAAGAGAGGTGTAGGAGGAGGTGCTGAGGCTGAAACACAAGCCCCTTCTGGTTGCATGTGTGCTGTTTTTCAGTTCTTTGATTTCCATCCTTTTCACTTTCCCAACATAAACCAACAACACCAACAAGATCAACAAGCCTCTTTTAAGCCACCCTCATGCACCTCAGAAGACCACACCACAGTCTCAAAAGGTGCTGAAGCACCTAGGAACAGCTTAGAGGCAGAGGATGGTGATGGTACAGTTTCATCTCTCTCATCAAAAGAAGATGATTTTAAAATTCCTAAGAATATTATACAAATTAAGACAAGTGGAGCCACAAGAACAAGTGGTGGAAATTTGAATGACTTGTCCTCAGAACTCACCAGCTCTCCAGGGACAAAGACACCAACTTTAGTGGCAAGGTTAATGGGTTTGGATCTTCTTCCAGGTGCAAACTCACCCTCTTTTTCTTCTTCATGTCTTTCAACTCCAAACACACAAGACAATGTGCCACATCTTCACCACCACCTGAGGCACAAGCAACATGTCCAAACCAAGCACAGGAACAGCGTAGATAGTAGTGACATTTCAGCCACAAGATCTTTGCCTGAGACACCAAGAATCTCCTCAGCAAGAAGATCAGATGTTGATCATCACCACAGACTCTCACTCCAAATCATAAAGGAAAACATGAACCTTGGTGAGGATTTGGAGCTCCCTAGGCTCTCATTTTCCAAAAGGAAGAGTGATGAGAACAATGGCAGGAGTCCAAGCCACTATGCCAGGCAAATTGTCAAACAGGCTAAGGAAAGTGTGAGCAGAAAAGTTGGGCAAGACATCACCAACACAACTCTCAAAGCAAGAGAAGAAAATGCAGGCCAATTCAGAAGCAAAAAGTCTCCCAAAACATCATCACTGAAAGCAATTGATGAAACTGAAACCAGCCCAAATAAACACTCAAACCAATCTTCCTACTCCCCAAGGCTTAGATTCATTGACAAACACAAACCAAGCACAACAACAACATCAACAGCACCATCACCACTCACCCCAAAAGATCAAAACATGCTGAAACTACCACCACCTCCTTCTCCAGTTAACACTCACCAACCTCAGCTTCCAAGAGTTTTAACAAAACCAAAGCTTCAAGCAGTGGTGCCAGAACAGAAAGAGTTTCATCAGAACAACAAATCTGTTCCAAAATGCAAAAAGGCTACCAATGAAAAAAAGTTCAACTCAAGGCTCATCAAAAGGCCTCCACAGACATCAGACATCATCAGAAACAAGCAAGAAGAACCATTCATCATTCGTCCCACATCGCCTACTAGAGCCAGTGACATCAAAAACACCAAAAGCAAGAAAAATCATCCATTGTCAAGCAATCTCCTCAACAACATCAGCAATGTACCAAATCTTCTACCTGTCAAGACAGACCCTTCTCCTTCGGCAACCAAAATTCCTTCCAAACAGTCACAGGTCTGTGATAGTCGTCATCAAGAGTCCAAAAGCAGTTCACAGTTATCTAGTTGTGCGCGCCAGAGGTACAAACAAGAAGAAACAACAACCACACTACTCGCTACCCGAGATAACAACGGTGCCTTCTTCTCCTCCTCCACCGTCACCCACCCTCCCACCCCACAAGAGCTTCAGTACATCACAGCAATCCTTGCACGTACCACTGCCCTAAACTCACAGGGTACCCCCACTACAGTTTCCTTAAACCAGCCCCTCGACCCATCAATCTTCCACCACCTCGAACACCCCGCCGGCGACAAAGATCGCAACTTTGCCCCGAAAGACCAACTGGGTCACCGTTGGAATCGGAGATTACTGTTCGATTTGGTTGACGAGGTTCTGAGGGAGATTCTGGAGTCTCAAGAGGGAGAGAGAGAAAAGAGGCTTTGGTTTTTGAAGGGTGGTATTTGTAACCAAAGAGGGAGGAGCGTTGAAGGGTTGGTGAAGAGGGTGTGGAAGAGGGTTGAGGAGTTCCCACGTGCCAAGTGTGAGGTGTTGGAGGACATTGATGAGTTGATTGACCTGCAGAGAGAGAAAGATGGTGAGAGAATGGAAGAAGAAGGGGAAGAACTGGTTGCAGAGATTGAAGGGAACATATGGGACACGTTAGTCCATGAAACGGTTATAGTTATGGATTGTTGGGAAAATGCTAAAAAAGAAAAATTATTACTATATGATGATTCCAAAATATCATCACATGTTTGCAGTCTCAGTCAATTTTAA 2253 0.4456 MGKEWYFAGRSSKRGVGGGAEAETQAPSGCMCAVFQFFDFHPFHFPNINQQHQQDQQASFKPPSCTSEDHTTVSKGAEAPRNSLEAEDGDGTVSSLSSKEDDFKIPKNIIQIKTSGATRTSGGNLNDLSSELTSSPGTKTPTLVARLMGLDLLPGANSPSFSSSCLSTPNTQDNVPHLHHHLRHKQHVQTKHRNSVDSSDISATRSLPETPRISSARRSDVDHHHRLSLQIIKENMNLGEDLELPRLSFSKRKSDENNGRSPSHYARQIVKQAKESVSRKVGQDITNTTLKAREENAGQFRSKKSPKTSSLKAIDETETSPNKHSNQSSYSPRLRFIDKHKPSTTTTSTAPSPLTPKDQNMLKLPPPPSPVNTHQPQLPRVLTKPKLQAVVPEQKEFHQNNKSVPKCKKATNEKKFNSRLIKRPPQTSDIIRNKQEEPFIIRPTSPTRASDIKNTKSKKNHPLSSNLLNNISNVPNLLPVKTDPSPSATKIPSKQSQVCDSRHQESKSSSQLSSCARQRYKQEETTTTLLATRDNNGAFFSSSTVTHPPTPQELQYITAILARTTALNSQGTPTTVSLNQPLDPSIFHHLEHPAGDKDRNFAPKDQLGHRWNRRLLFDLVDEVLREILESQEGEREKRLWFLKGGICNQRGRSVEGLVKRVWKRVEEFPRAKCEVLEDIDELIDLQREKDGERMEEEGEELVAEIEGNIWDTLVHETVIVMDCWENAKKEKLLLYDDSKISSHVCSLSQF* 751
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1603 750 MobiDBLite consensus disorder prediction 51 99 - -
Gso16g1603 750 Pfam DUF761-associated sequence motif 129 158 IPR032795 -
Gso16g1603 750 MobiDBLite consensus disorder prediction 302 333 - -
Gso16g1603 750 MobiDBLite consensus disorder prediction 272 377 - -
Gso16g1603 750 MobiDBLite consensus disorder prediction 360 374 - -
Gso16g1603 750 MobiDBLite consensus disorder prediction 341 356 - -
Gso16g1603 750 MobiDBLite consensus disorder prediction 115 139 - -
Gso16g1603 750 MobiDBLite consensus disorder prediction 279 295 - -
Gso16g1603 750 MobiDBLite consensus disorder prediction 195 213 - -
Gso16g1603 750 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 725 - -
Gso16g1603 750 MobiDBLite consensus disorder prediction 183 223 - -
Gso16g1603 750 MobiDBLite consensus disorder prediction 413 519 - -
Gso16g1603 750 MobiDBLite consensus disorder prediction 459 519 - -
Gso16g1603 750 Pfam Domain of unknown function (DUF4378) 553 716 IPR025486 -
Gso16g1603 750 MobiDBLite consensus disorder prediction 51 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1603 Gso-Chr16 36620758 36624925 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1603 110 724 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 34.365 1.68e-59 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1603 - - gmx:100791539 1402.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1603 16 36620758 36624925 Gso9g1225 9 35237677 35242047 GST
Gso16g1603 16 36620758 36624925 Gso20g1235 20 42357117 42362421 PCT
Gso16g1603 16 36620758 36624925 Gso10g2146 10 48487063 48491163 PCT
Gso20g1235 20 42357117 42362421 Gso16g1603 16 36620758 36624925 PCT
Gso10g2146 10 48487063 48491163 Gso16g1603 16 36620758 36624925 PCT