Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1593 ATGGGTAAGGGGGGAATGTCAATTGATGAACATGGAGAAGGCAAAGAAGAGAATATGGCTGCTTGGCTTGTTGGAATGAACACTCTCAAGATTCAGCCTTTCAAGCTTCCTACTTTGGGACCCCATGATGTCAGAGTTAGAATGAAGGCTGTTGGTATCTGTGGGAGTGATGTTCACTACCTCAAGACACTGAGGTGTGCTCACTTTATAGTTAAAGAACCAATGGTTATTGGTCATGAGTGTGCTGGGATCATAGAAGAAGTTGGTAGTCAGGTAAAGAGTTTGGTGCCTGGTGACCGTGTGGCAATTGAGCCTGGGATCAGTTGTTGGCATTGCAACCATTGCAAACACGGTCGATATAACTTATGCGATGATATGAAGTTTTTTGCTACTCCACCAGTTCATGGTTCCCTGGCTAATCAGATAGTGCATCCTGCAGACCTATGTTTTAAGCTGCCAGACAACGTGAGCCTAGAGGAGGGAGCAATGTGTGAACCCTTAAGTGTTGGTGTTCATGCTTGTAGAAGAGCTAATATTGGACCAGAAACAAATGTGTTGATCATGGGAGCAGGGCCCATAGGACTTGTTACAATGCTGGCAGCTCGTGCGTTTGGGGCACCCAAAACAGTCATTGTGGATGTTGATGACCATCGTTTATCTGTTGCAAAATCTCTTGGTGCAGATGATATTATTAAAGTCTCAACAAACATTAAGGATGTGGCTGAAGAAGTTGTGCAGATACAGAAGGTTATGGGAGCTGGTATAGATGTTACCTTTGATTGTGCTGGTTTTGACAAAACCATGTCTACAGCACTGAGTGCTACTCAGCCAGGTGGCAAAGTTTGCCTAGTGGGAATGGGACATTCTGAAATGACTGTCCCACTCACCCCAGCTGCAGCAAGGGAAGTTGATGTGGTTGGAGTTTTTCGCTATATGAACACATGGCCTCTTTGCCTTGAGTTTCTAAGGAGTGGCAAAATTGATGTGAAACCCCTTATAACGCACAGGTTTGGATTCTCTCAAAAGGAAGTGGAAGAAGCCTTTGAAACAAGTGCTCGTGGTGGTAACGCCATCAAGGTCATGTTCAATCTTTAG 1095 0.4475 MGKGGMSIDEHGEGKEENMAAWLVGMNTLKIQPFKLPTLGPHDVRVRMKAVGICGSDVHYLKTLRCAHFIVKEPMVIGHECAGIIEEVGSQVKSLVPGDRVAIEPGISCWHCNHCKHGRYNLCDDMKFFATPPVHGSLANQIVHPADLCFKLPDNVSLEEGAMCEPLSVGVHACRRANIGPETNVLIMGAGPIGLVTMLAARAFGAPKTVIVDVDDHRLSVAKSLGADDIIKVSTNIKDVAEEVVQIQKVMGAGIDVTFDCAGFDKTMSTALSATQPGGKVCLVGMGHSEMTVPLTPAAAREVDVVGVFRYMNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFNL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1593 364 Pfam Alcohol dehydrogenase GroES-like domain 41 152 IPR013154 -
Gso16g1593 364 Gene3D - 169 309 - -
Gso16g1593 364 CDD sorbitol_DH 20 363 IPR045306 GO:0016616
Gso16g1593 364 SMART PKS_ER_names_mod 25 362 IPR020843 GO:0016491
Gso16g1593 364 SUPERFAMILY GroES-like 20 191 IPR011032 -
Gso16g1593 364 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
Gso16g1593 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 328 IPR036291 -
Gso16g1593 364 PANTHER L-IDONATE 5-DEHYDROGENASE 13 364 - -
Gso16g1593 364 Gene3D - 29 350 - -
Gso16g1593 364 PANTHER SORBITOL DEHYDROGENASE 13 364 - -
Gso16g1593 364 Pfam Zinc-binding dehydrogenase 192 322 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1593 Gso-Chr16 36525485 36530336 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1593 31 297 Monolignol Biosynthesis Gene Families AT4G37980 26.978 1.28e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1593 K00008 - gmx:100820630 745.732