Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1585 ATGACACCTTTGCGAGTGGCAGGTGGATTAACCCAATCATCATCAAATTCTGGAATTTTCTATCAAGGAGATGGGCAGTCACAGAATGTAGTTAACTCTCACTTAAGCTCATCTTTTGTTAACTCGTCTAGCACGGTTTCTGGAGCTTCTCGTTCAAACCTGGGTCCGGTTTCTGGGGATATGAATAATGCAGTTTTGAACAGTGTGGCAAACTCAGCACCAAGTGTAGGAGCCAGCTCTTTAGTTACAGATGCAAATTCTGCACTCTCTGGTGGCCCACATTTGCAGAGAAGTGCCAGCGTTAACACAGACTCATACTTACGATTACCTGCCTCACCTATGTCATTTACATCAAATAATATCAGTATTTCTGGATCATCAGTGATGGATGTTTCCTCTGTAGTACAACAGAGCTCTCATCAAGATCAGAATGTTCAACAATTGCAGCAGAATCAGCAGCAGCCACAGGGTGCTTCAAGTGCTATGTCTTTGTCTGCATCTCAAACTGGCCCTTCTATGCTCCAAATGGGTGCACAAATCCCAGGATCTTTCATTCAAGATCCAAATAATATGTCTCATCTGTCAAAGAAACCTAGAATGGATATCAAACAGGAAGATATGATGCAGCAGCAGGTTATACAACAGATTCTTCAGAGACAAGATTCCATGCAATTCCAGGGTCGTAATCCCCAGTTACAGGCTTTCCTTCAGCAGCAGCAGCAGAGACTGAGACAACAACAAATGTTTCAGCAAATGCCACAATTACACCGAGCACACTTGCAGCAGCAGCAACAACAACAACAAATGCAATTGAGGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAGCAACAGCAAGTGATGCAGCCCTCTTCTGTGGTCAAGCGTCCATATGACAGTAGTGTTAGTGGGGTATGTGCCCGTCGATTGATGCAGTATCTCTATCATCAAAGGCAACGACCAAATGATAATAGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCTCCTCGTGCAAAGAAACGGTGGTGCTTGTCATTATATAGTAATGTTGGGCATCACGCACTTGGTGTTTTTCCCCAAGCATCTATGGATGCATGGCACTGTGACATATGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTATGAAGTATTACCTAGACTTAATGAAATCAAATTTGGCAGTGGAGTAATTGATGAACTATTGTTTCTGGACATGCCACGTGAAATGAGATTCGCTTCTGGTGCGATGATGTTAGAATATGGAAAAGCAGTTCAAGAGAGTGTATATGAGCAGCTTCGTGTTGTTCGTGAAGGTCAACTTCGTATCATATTCACTCAAGACTTGAAGATATTATCTTGGGAGTTCTGTGCAAGGTGCCATGAGGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAACCAGTTAGTTCAGGTAGCTAAAAAATGTCAAAGTACAATTGCTGAAAGTGGTTCTGATGGGGTTTCTCAACAAGACATCCAAACAAACAGCAACATGTTGTTGACAGCTGGGGGTCAGCTTGCGAAGATTTTGGAGATGCAATCGCTAAATGAGTTGGGCTTTTCTAAAAGATACGTGAGATGTTTGCAAATTTCGGAGGTTGTCAATAGCATGAAAGACCTAATAGATATCTGTGCAGATCACAAAATTGGTGCCATTGAGAGTTTGAAAAATTTTCCTCGTCTAGCAACAGCCTCAAAGGTCCAGATGCAGAAGATGCAGGAAATGGAACAGCTAGCAAATGTTCAAGGTCTGCCAACTGATCGAAACACACTCAATAAGCTAATGGCACTGAATCCTGGATTGAACAACCATATAAACAACCCTCATAATATGGTTAATCGTGGTGCTTTGAGTGGGTCAGCCCAAGCTGCTTTAGCACTGAACAACTACCAAAATCTTCTCATGAGGCAAAATTCAATGAACTCTAGCCCTGGCTCACTTCAGCGCGAAGGGTCCTCTTTCAATAATTCAAACCAGAGTCCATCTTCAGCTTTGCAAGGAGCTGGTCCTGCTTTAATTCCAGGCCCAATGCAGAATTCATCTGTTAGTGGTTTCCCAAGCCCCCGTCTACCCCCACAGCAGCAGCAACACCACCTACAACAGCCCTCATTAAGTGCAAATGCTTTACTGCAACAAAATCATTCACAGGGTTCCCAAGGAAATCAAGCTCTGCAGCAGCAGATGATCCATCAACTACTGCAGGAGATGTCAAATAACAACGGGGGAGTGCAACCACAGTCTCTTGGTGGACCCAGTGCAAATATGGCAAAGAATGCACTGGGGTTTGGGGGCCATTATCCATCCTTAAGTGGAGGTTCTGCCAATGTTACAGGAAACAATGGACCTATGTCAAGGAATAATAGCTTCAAAACAACTGCAAATAGTGATTCTTCTGCTGCTGGTGGCAACAATGGATTAAACCAGAGAACATCTGAGATGCCACAAAATCTACATTTGCAAGATGTGGTTCAGGATATTGGCAATGAATTCACGGATAATCCCTTCCTTAACAGTGATCTTGATGATAACATGGGTTTTGGCTGGAAGGCATGA 2637 0.4327 MTPLRVAGGLTQSSSNSGIFYQGDGQSQNVVNSHLSSSFVNSSSTVSGASRSNLGPVSGDMNNAVLNSVANSAPSVGASSLVTDANSALSGGPHLQRSASVNTDSYLRLPASPMSFTSNNISISGSSVMDVSSVVQQSSHQDQNVQQLQQNQQQPQGASSAMSLSASQTGPSMLQMGAQIPGSFIQDPNNMSHLSKKPRMDIKQEDMMQQQVIQQILQRQDSMQFQGRNPQLQAFLQQQQQRLRQQQMFQQMPQLHRAHLQQQQQQQQMQLRQQQQQQQQQQQQQQQQQQQQQQQQQQQQQVMQPSSVVKRPYDSSVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYSNVGHHALGVFPQASMDAWHCDICGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDMPREMRFASGAMMLEYGKAVQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARCHEELLPRRLVAPQVNQLVQVAKKCQSTIAESGSDGVSQQDIQTNSNMLLTAGGQLAKILEMQSLNELGFSKRYVRCLQISEVVNSMKDLIDICADHKIGAIESLKNFPRLATASKVQMQKMQEMEQLANVQGLPTDRNTLNKLMALNPGLNNHINNPHNMVNRGALSGSAQAALALNNYQNLLMRQNSMNSSPGSLQREGSSFNNSNQSPSSALQGAGPALIPGPMQNSSVSGFPSPRLPPQQQQHHLQQPSLSANALLQQNHSQGSQGNQALQQQMIHQLLQEMSNNNGGVQPQSLGGPSANMAKNALGFGGHYPSLSGGSANVTGNNGPMSRNNSFKTTANSDSSAAGGNNGLNQRTSEMPQNLHLQDVVQDIGNEFTDNPFLNSDLDDNMGFGWKA* 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1585 878 Coils Coil 257 301 - -
Gso16g1585 878 PANTHER LIM DOMAIN-BINDING PROTEIN 267 877 IPR029005 -
Gso16g1585 878 PANTHER LIM DOMAIN-BINDING PROTEIN 162 281 IPR029005 -
Gso16g1585 878 PANTHER LIM DOMAIN-BINDING PROTEIN 5 151 IPR029005 -
Gso16g1585 878 MobiDBLite consensus disorder prediction 132 176 - -
Gso16g1585 878 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 5 151 - -
Gso16g1585 878 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 267 877 - -
Gso16g1585 878 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 162 281 - -
Gso16g1585 878 MobiDBLite consensus disorder prediction 665 730 - -
Gso16g1585 878 MobiDBLite consensus disorder prediction 132 195 - -
Gso16g1585 878 Pfam LIM-domain binding protein 324 584 IPR029005 -
Gso16g1585 878 MobiDBLite consensus disorder prediction 804 843 - -
Gso16g1585 878 MobiDBLite consensus disorder prediction 665 694 - -
Gso16g1585 878 MobiDBLite consensus disorder prediction 704 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1585 Gso-Chr16 36392650 36399854 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1585 319 588 C2H2 Transcription Factor Family AT1G43850 59.630 1.96e-107 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1585 - - gmx:547529 1411.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1585 16 36392650 36399854 Gso16g1585 16 36392650 36399854 ECH
Gso16g1585 16 36392650 36399854 Gso9g1204 9 34701556 34708704 GST