Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1584 ATGCCCCCCATGACACCTTCTCGGGTGGCAGGAGGGTTAACCCAATCATCTTCACATTCTGGAATTTTCTTTCAAGGAGATGGGCAGTCACAGAATGTAGTTAACTCTCACTTAAGCTCATCTTTTGTTAACTCGTCTAGCACGGTTCCAGGAGCCAGTCGTTCAAACCTGGGTCCGGTTTCTGGGGGTATGAATAATGCAGTTTTGAACAGTGTGCCAAACTCAGCACCAAGTGTTGGAGCCAGTTCTTTAGTCACGGATGCAAATTCTGCTCTCTCTGGTGGCCCCCATTTGCAGAGAAGTGCCAGTGTTAACACAGACTCTTACTTACGATTACCTGCCTCTCCTATGTCATTTACATCGAATAATATAAGTATTTCTGGCTCATCGGTGATGGATGGTTCCTCTGTGGTACAACAGAGCTCTCACCAAGATCAGAATGTTCAACAATTGCAGCAGAATCAGCAGCAGCCGCAGGGTGCTTCAAGTGCTACATCGCAGACTGGTCTGTCTCCCCTCCAAATGGGTGCACAAGTCCCAGGATCTTTCATTCAAGATCCAAATAATATGTCTCATCTGTCAAAGAAACCTAGAATGGATATCAAACAGGAAGATGTAATGCAGCAGCAGGTTATACAACAGATTCTTCAGAGACAAGATTCCATGCAATTCCAGGGTCGTAATCCCCAGTTACAGGCTTTGCTTCAGCAGCAGCAGAGACTGAGACAACAGCAAATCTTTCAGTCAATGCCACAATTACAGCGAGCCCACTTGCAACAGCAGCAGCAACAGCAACAACAACAACAGCATCAACAACAACAAATGCAATTGAGGCAGCAATTACAGCAACAAGCGATGCAGCCCTCTTCTGCTGGCAAGCGTCCATATGACAGTGGTGTTAGTGGGGTATGTGCCCGTCGATTGATGCAGTATCTCTATCATCAAAGGCAAAGGCCAAATGATAATAGTATTGCCTATTGGAGAAAATTTGTTGCTGAATATTACTCTCCTCGTGCAAAGAAACGGTGGTGCTTGTCATTATATAGCAATGTTGGGCATCATGCACTTGGTGTTTTCCCCCAAGCAGCTATGGATGCATGGCAGTGTGACATGTGTGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTATGAAGTGTTACCTAGGCTTAATGAAATCAAATTTGGAAGTGGAGTGATTGATGAACTTTTGTTTCTGGACTTGCCTCGTGAAACAAGATTTCCTTCTGGTGTGATGATGTTGGAATATGCAAAAGCAATTCAAGAGAGTGTATATGAGCAGCTTCGTGTTGTTCGTGAAGGTCAACTTCGCATCATATTCACTCAAGACTTGAAGATCTTATCTTGGGAGTTCTGTGCAAGACGCCACGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCACAGGTCAACCAATTAGTTCAGGTAGCTCAAAAATGCCAGAGTACAATTGCTGAAAGTGGGGCTGATGGGGTTTCTCAGCAAGACTTACAAACAAACAGCAACATGGTATTGACAGCAGGGCGCCAGCTTGCAAAGATTTTGGAGTTGCAATCACTGAATGATTTGGGCTTTTCTAAAAGATACGTGAGATGTTTGCAGATTTCGGAGGTTGTCAATAGCATGAAAGACCTAATAGATATCTGTGCAGAGCACAAAATTGGTGCAATTGAGAGTCTGAAAAATTATCCTCGACTAGCAACAGCCTCAAAGGGCCAGATGCAAAAGATGCAGGAAATGGAACAGCTGGCAAATGTTCAAGGTCTGCCAACTGATCGAAACACACTCAACAAGCTAATGACACTGAATCCTGGATTGAACAACCATATAAACAACACTAATAATATGGTTGGTCGTGGTGCTTTGAGTGGGTCAGCCCAAGCTGCTTTAGCACTGAACAACTACCAAAATCTTCTCATGAGGCAAAATTCAATGAACTCTAGCCCTGGCTCACTTCAGCGCGAAGGGTCCTCTTTCAATAATTCAAACCCGAGTCCCTCTTCTGCTTTGCAAGGAACTGGTCCTGCTTTAATTCCAGGCTCAATGCAGAACTCGCCTGTAGGTGGTTTCCCAAGTCCCCATCTAACCCCACAGCAGCAGCAACAACAACTCCTTCAACAGCGCACATTAAGTGCAAATGGTTTACTTCAACAAAATCATTCACAGGGGTCCCAAGGAAATCAAGCTCTACAGCAGCAGCAGATGATCCAGCAATTGCTGCAGGAAATGTCAAATAACAATGGGGGACTGCAATCACAGTCTCTTGGTGGACATAATGCAAATGGGAATATTTCAAAGAACACAATGGGTTTTGGGGGCCATACTCCATCTTTAAGCGGAGGTTCTGCCAATGTTCCAGGAAACAATAGACCCATTTCAAGGAATAATAGCTTCAAAACAGCTTCAAATAGTGATTCTTCTGCGGCCGGTGGCAACAATGGATTCAACCAGAGAACATCTGATATGCAACAAAATCTACATTTGCAAGACGTGGCTCAGGATATTGGCAATGAGTTCTTGGATAACCCCTTCTTTAACAGCGATCTTGATGACAACATGGGTTTCAGCTGGAAGGCATGA 2598 0.4446 MPPMTPSRVAGGLTQSSSHSGIFFQGDGQSQNVVNSHLSSSFVNSSSTVPGASRSNLGPVSGGMNNAVLNSVPNSAPSVGASSLVTDANSALSGGPHLQRSASVNTDSYLRLPASPMSFTSNNISISGSSVMDGSSVVQQSSHQDQNVQQLQQNQQQPQGASSATSQTGLSPLQMGAQVPGSFIQDPNNMSHLSKKPRMDIKQEDVMQQQVIQQILQRQDSMQFQGRNPQLQALLQQQQRLRQQQIFQSMPQLQRAHLQQQQQQQQQQQHQQQQMQLRQQLQQQAMQPSSAGKRPYDSGVSGVCARRLMQYLYHQRQRPNDNSIAYWRKFVAEYYSPRAKKRWCLSLYSNVGHHALGVFPQAAMDAWQCDMCGSKSGRGFEATYEVLPRLNEIKFGSGVIDELLFLDLPRETRFPSGVMMLEYAKAIQESVYEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAESGADGVSQQDLQTNSNMVLTAGRQLAKILELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDICAEHKIGAIESLKNYPRLATASKGQMQKMQEMEQLANVQGLPTDRNTLNKLMTLNPGLNNHINNTNNMVGRGALSGSAQAALALNNYQNLLMRQNSMNSSPGSLQREGSSFNNSNPSPSSALQGTGPALIPGSMQNSPVGGFPSPHLTPQQQQQQLLQQRTLSANGLLQQNHSQGSQGNQALQQQQMIQQLLQEMSNNNGGLQSQSLGGHNANGNISKNTMGFGGHTPSLSGGSANVPGNNRPISRNNSFKTASNSDSSAAGGNNGFNQRTSDMQQNLHLQDVAQDIGNEFLDNPFFNSDLDDNMGFSWKA* 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1584 865 Pfam LIM-domain binding protein 307 567 IPR029005 -
Gso16g1584 865 MobiDBLite consensus disorder prediction 9 28 - -
Gso16g1584 865 MobiDBLite consensus disorder prediction 130 194 - -
Gso16g1584 865 MobiDBLite consensus disorder prediction 264 299 - -
Gso16g1584 865 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 164 863 - -
Gso16g1584 865 PANTHER LIM-DOMAIN BINDING PROTEIN/SEUSS-RELATED 8 154 - -
Gso16g1584 865 Coils Coil 253 283 - -
Gso16g1584 865 PANTHER LIM DOMAIN-BINDING PROTEIN 8 154 IPR029005 -
Gso16g1584 865 PANTHER LIM DOMAIN-BINDING PROTEIN 164 863 IPR029005 -
Gso16g1584 865 MobiDBLite consensus disorder prediction 1 28 - -
Gso16g1584 865 MobiDBLite consensus disorder prediction 648 711 - -
Gso16g1584 865 MobiDBLite consensus disorder prediction 752 825 - -
Gso16g1584 865 MobiDBLite consensus disorder prediction 264 291 - -
Gso16g1584 865 MobiDBLite consensus disorder prediction 130 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1584 Gso-Chr16 36383980 36390826 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1584 302 571 C2H2 Transcription Factor Family AT1G43850 60.741 1.03e-108 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1584 - - gmx:100816886 1443.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1584 16 36383980 36390826 Gso9g1202 9 34650869 34658520 GST