Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1577 ATGGGTTTTCTCCGGCGACTCTTCGGCGGCAAGAAGCACCACAACCCACCACCCTCCTCCGACGCCTCCAAACCCAGCAAAGACAAGAAAACATGGAGCTTCGTCAAACACAGTACGAGGTACAAACCCAACACATTACCAACAACACTTAACAACAACAGCAACTTTGACCCTTCCACTTCCTCCTCTCCTTTCCCCGAATCTTTGGACGCCAACAAACATGCCATCGCCGTCGCCGCCGCCACCGCCGCTGTCGCCCAAGCCGCTCTCGCCGCCGCACACGCTGCTGCCGAGGTTGTCAGGCTGACCAGCAGCACCGGCTGTGCCTCCAGCCTGCCCGCCGCGGCGCCGCAGTCCCGGCGCGTGGCGAATGAAACCACCGCCGCCGCAGTGAAAATCCAGTCGGCGTTTCGAGGTTACTTGGCAAGGAGGGCATTGAGAGCACTTAAAGCATTGGTGAAGTTGCAAGCATTGGTGAGGGGTCACATTGTGAGGAAGCAAACTTCAGATATGCTAAGGCGCATGCAAACCTTGGTGAGACTGCAGTCCCGGGCACGTGCAACTCGTGGGAACTTGTCAGATAATATGCATTCTTTCAAGTCTTCACTTTCTCATTACCCTGTCCCTGAAGATTATCAGCACTCACTTCGTGCCTATAGTACAAAATTTGATGGATCTATTCTCAAGAGATGTAGTTCCAATGCAAATTTTAGGGACATTGACGTGGAGAAAGCTCGTTTCGGTTCCCATTGGTTAGACAGTTGGATGGAAGAAAATTCTTGGAGACAAACTAGAGATGCATCATTGAAAAATGGACACCTTGATGATGAGAAGAGTGACAAGATTCTTGAAGTAGATACTTGGAAGCCACACTTGAACTCACACCATAGTAGTGGCAGCTCATTTCAGACATCATCACATCATTATTTGTCTTCTGATTACAACAATGAGAATTTTGTGGCCTATGAGTCTCCATCCAAACGTTCTTCCAAAGCTCTAAATCCAAGTCTATCTTCTAGGGAGGTTCTTCCCTTTGGCTCTTTGAAATCTCACAAAGGAAAAGAAGAAGCGGCTTTGCAAAATGTTGAGGATAGTCCTCAAGCATTTTCTGCCTCCTCTAGACTTGGAAGTGATGCAAGGAGAGGTCCATTCACACCAACTAAGAGTGAGTGTGCATGGAGTTTCTTCAGTGGCTACCCGGGTCATCCCAATTACATGGCGAATACCGAGTCTTCTAGAGCCAAGGTTAGGTCACATAGTGCTCCAAGGCAAAGAATGGAATTTGAGAGATATGGTCATTCCACAAGAAGGTCTCTTCAGGGTCTTTGGGAAGCAGGGCCTAGTTCAGATAGGGATTCTGATTTTAGGAGCAAGGCCTATGCAACAACCACAAGCAGCTGTTTGAACAGAATTGGGAGTGCCAATTTAAGGTGA 1434 0.4868 MGFLRRLFGGKKHHNPPPSSDASKPSKDKKTWSFVKHSTRYKPNTLPTTLNNNSNFDPSTSSSPFPESLDANKHAIAVAAATAAVAQAALAAAHAAAEVVRLTSSTGCASSLPAAAPQSRRVANETTAAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQTSDMLRRMQTLVRLQSRARATRGNLSDNMHSFKSSLSHYPVPEDYQHSLRAYSTKFDGSILKRCSSNANFRDIDVEKARFGSHWLDSWMEENSWRQTRDASLKNGHLDDEKSDKILEVDTWKPHLNSHHSSGSSFQTSSHHYLSSDYNNENFVAYESPSKRSSKALNPSLSSREVLPFGSLKSHKGKEEAALQNVEDSPQAFSASSRLGSDARRGPFTPTKSECAWSFFSGYPGHPNYMANTESSRAKVRSHSAPRQRMEFERYGHSTRRSLQGLWEAGPSSDRDSDFRSKAYATTTSSCLNRIGSANLR* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1577 477 MobiDBLite consensus disorder prediction 1 67 - -
Gso16g1577 477 PANTHER CALMODULIN-BINDING PROTEIN 1 475 - -
Gso16g1577 477 MobiDBLite consensus disorder prediction 37 67 - -
Gso16g1577 477 Pfam IQ calmodulin-binding motif 127 147 IPR000048 GO:0005515
Gso16g1577 477 Pfam IQ calmodulin-binding motif 150 167 IPR000048 GO:0005515
Gso16g1577 477 SMART iq_5 125 147 IPR000048 GO:0005515
Gso16g1577 477 SMART iq_5 148 169 IPR000048 GO:0005515
Gso16g1577 477 ProSiteProfiles IQ motif profile. 126 154 IPR000048 GO:0005515
Gso16g1577 477 Gene3D - 123 179 - -
Gso16g1577 477 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 119 171 IPR027417 -
Gso16g1577 477 ProSiteProfiles IQ motif profile. 150 177 IPR000048 GO:0005515
Gso16g1577 477 Pfam Protein of unknown function (DUF4005) 365 440 IPR025064 -
Gso16g1577 477 PANTHER IQ-DOMAIN 5-RELATED 1 475 - -
Gso16g1577 477 MobiDBLite consensus disorder prediction 344 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1577 Gso-Chr16 36312382 36318141 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1577 1 443 IQD Protein Family AT5G62070 45.952 2.11e-66 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1577 - - gmx:100785181 860.522
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1577 16 36312382 36318141 Gso9g1187 9 34173855 34179437 GST
Gso16g1577 16 36312382 36318141 Gso20g1251 20 42568881 42573579 PCT
Gso16g1577 16 36312382 36318141 Gso10g2125 10 48265254 48270123 PCT
Gso20g1251 20 42568881 42573579 Gso16g1577 16 36312382 36318141 PCT
Gso10g2125 10 48265254 48270123 Gso16g1577 16 36312382 36318141 PCT