Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1566 ATGTGGATCTCTCAGCAAGAAAACTCTTCAAGTTGGTTCTTCCTCCCAGTTGTTACCTTCATCATCCTCTTTCTTCTACGTACTTTCCTCAATCTTTTATCCAAACGGAACAATGATTCCAAAAAACCCTCACCACCATCTCCTCCAAAGCTTCCAATAATAGGAAACCTCCATCAACTTGGTACCCACATTCACCGCAGTCTCCAATCCTTAGCTCAAACCTATGGTTCTTTAATGCTACTTCACTTAGGAAAAGTGCCAGTCCTTGTTGTCTCCACAGCTGAGGCAGCTCGTGAAGTTTTGAAAACACATGACCCCGTTTTCTCCAACAAACCACATCGTAAGATGTTTGATATCCTCTTGTATGGTTCCAAAGATGTGGCATCTGCTCCATATGGCAACTACTGGAGGCAGACAAGGAGTATCCTTGTTTTGCATCTTCTCAGTGCCAAAAAGGTTCAATCCTTCGAGGCAGTGAGAGAAGAGGAAATCTCCATAATGATGGAAAATATTAGGAAGTGTTGTGCTTCATTGATGCCTGTGGATTTAACTGGCTTATTTTGTATAGTAGCCAATGATATAGTGTGTAGAGCTGCTCTTGGAAGAAGATACAGTGGAGAAGGAGGGAGTAAGCTTCGCGGGCCGATCAACCAGATGGCGGAGCTGATGGGTACTCCGGTTTTAGGAGACTATTTACCTTGGCTTGATTGGTTGGGGAGAGTTAATGGCATGTATGGTAGGGCAGAGAGAGCGGCTAAAAAGGTTGATGAATTCTTTGATGAAGTTGTTGATGAGCATGTTAATAAGGGAGGCCATGATGGGCATGGTGATGGTGTCAATGATGAAGACCAGAATGATTTGGTGGACATTTTGTTGAGGATCCAAAAGACAAACGCCATGGGATTTGAGATTGATAGAACAACCATAAAGGCTTTGATACTGGATATGTTTGGTGCAGGTACTGAAACTACCTCCACAATTCTAGAGTGGATAATGACAGAACTCTTAAGGCATCCAATAGTGATGCAAAAGCTACAAGGTGAGGTCAGGAATGTGGTTAGAGATAGAACCCACATATCCGAAGAGGATTTGAGTAATATGCATTACTTGAAGGCAGTGATTAAAGAAACTTTTCGATTACATCCCCCAATTACCATATTGGCCCCAAGGGAATCCACGCAAAATACTAAGGTGATGGGCTATGACATTGCAGCTGGCACGCAAGTAATGGTTAATGCTTGGGCAATTGCAAGAGATCCTTCATATTGGGACCAGCCTGAAGAGTTTCAGCCAGAAAGGTTCCTAAATAGTTCAATTGATGTCAAAGGACATGATTTCCAACTGCTCCCATTTGGAGCAGGAAGGAGGGCTTGCCCAGGATTAACATTTTCCATGGTTGTAGTTGAGCTGGTAATAGCAAACCTTGTTCACCAATTTAATTGGGCAATACCTAAAGGAGTGGTGGGGGATCAGACAATGGACATAACTGAAACTACTGGGTTATCCATTCATAGAAAATTTCCTCTTATAGCAATTGCATCCCCACATGCATAA 1554 0.4279 MWISQQENSSSWFFLPVVTFIILFLLRTFLNLLSKRNNDSKKPSPPSPPKLPIIGNLHQLGTHIHRSLQSLAQTYGSLMLLHLGKVPVLVVSTAEAAREVLKTHDPVFSNKPHRKMFDILLYGSKDVASAPYGNYWRQTRSILVLHLLSAKKVQSFEAVREEEISIMMENIRKCCASLMPVDLTGLFCIVANDIVCRAALGRRYSGEGGSKLRGPINQMAELMGTPVLGDYLPWLDWLGRVNGMYGRAERAAKKVDEFFDEVVDEHVNKGGHDGHGDGVNDEDQNDLVDILLRIQKTNAMGFEIDRTTIKALILDMFGAGTETTSTILEWIMTELLRHPIVMQKLQGEVRNVVRDRTHISEEDLSNMHYLKAVIKETFRLHPPITILAPRESTQNTKVMGYDIAAGTQVMVNAWAIARDPSYWDQPEEFQPERFLNSSIDVKGHDFQLLPFGAGRRACPGLTFSMVVVELVIANLVHQFNWAIPKGVVGDQTMDITETTGLSIHRKFPLIAIASPHA* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1566 517 Pfam Cytochrome P450 45 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1566 517 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1566 517 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1566 517 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1566 517 SUPERFAMILY Cytochrome P450 45 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1566 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Gso16g1566 517 PANTHER CYTOCHROME P450 FAMILY PROTEIN 20 515 - -
Gso16g1566 517 PANTHER CYTOCHROME P450 71B11-RELATED 20 515 - -
Gso16g1566 517 Gene3D Cytochrome P450 31 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1566 517 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1566 517 PRINTS E-class P450 group I signature 96 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1566 517 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1566 517 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1566 517 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1566 517 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1566 517 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1566 517 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1566 517 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1566 Gso-Chr16 36200191 36202776 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1566 35 514 Cytochrome P450 AT3G48270 51.559 0.0 521
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1566 - - gmx:100810137 1008.05