Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1505 ATGGAGTTCTCAGCACTTGCCCTCTTTTCTATTTTACCTCTTCTTTTGCTCTTGAAACTAACGTTTTCTTGGTGGGTTTCACCAATCATAAACCATCTTAAGCTTAAAAGATGTGGATTTGGAGGGCCACCCCCAAGCTTTCCTCTTGGAAACATTCAAGAGATGAAAAAGAAAACTAGCGTTAGTTCTTCATTGGGGTCCTCTAATCTCACCCATGATATACACTCCACTGTGTTCCCCTATTTTTTTCGGTGGCAAAACTCTCACGGAAAGGTGTTTATCTATTGGCTTGGTACAGAACCGTTTTTGTACATTGCAGATCCAGAATTCTTGAAAAAAATGTCCACAGAGGTCTTGGCCAAGAGATGGGGAAAACCTAGAGTGTTTAGACATGACAGAGATCCTATGTTTGGAAATGGTTTGGTTATGGTTGAAGGCAATGAATGGGTTCGTCACCGACATGTTATAGCACCAGCATTTTCTCCTCTTAATTTGAAGGCAATGGCAAGCATGATGACTGAGTCTACAAATCAGATGATAGATAGGTGGATTGCACAAATCAACTCCGGAAACCCCGAAATCGATGTGGAAAGAGAGGTTGTAGAAACGGCCGGAGAAATTATTGCAAAAACAAGCTTTGGCATGAAGGGGAAAAATGCAAAGGAAGTGTCTGAAAAACTACGTGCCCTACAAATGACACTTTTCAAGACAACAAGATATGTGGGTGTTCCATTTGGCAAGTGTTTCAACGTCAAGAAAACCCTAGAGGCCAAGAAGCTTGGCAAAGAGATTGACAAGCTCTTGTTATCCGTCATAACATCTCGTATGAAATCAATCAAAAGACAAACTCAAGAAGACTTGTTGGGATTGTTGTTGCAAGGAAACAATCATCAAGGTGATGGCAAGTTAGGGAAGACATTCACCACTAGAGACTTGTTGGATGAGTGCAAGACTTTCTTCTTTGCTGGCCATGAAACAACGGCATTGGCTATCTCATGGACTTTGTTGCTTCTAGCTATAAATGAAGATTGGCAAATCCAGTTAAGAGATGAGATAAGAGAAGTGGTCGGTGATAAAGAACTTGATATCAACGTGCTTGCGGGGCTTAGAAAGATGAAGTGGGTGATGAATGAAGTTCTAAGACTCTACCCAACGGCACCAAATGTGCAAAGGCAAGCAAGGGAAGACATTAAAGTTGATAACTTAACAGTGCCTAATGGGACCAACATGTGGATCGATGTTGTGGCGATGCACCATGACCCGGCATTGTGGGGAAAAGATGTCAACGACTTTAGACCAGAGAGATTCATGAATGACGTCAATGGTGGATGTAACCACAAAATGGGGTACTTGCCTTTTGGTTTTGGAGGGAGAATGTGTGTTGGTAGGAACTTGAGCTTTATGGAGTATAAGATAGTGTTAACCCTACTCCTGTCTAGATTTAGTTTCAAAGTTTCACCAGGTTATAACCATGCACCCTCTATCATGCTCTCCCTTAGGCCCACCTATGGACTTCATCTCATAGTTCAGCCACTTTAG 1539 0.4204 MEFSALALFSILPLLLLLKLTFSWWVSPIINHLKLKRCGFGGPPPSFPLGNIQEMKKKTSVSSSLGSSNLTHDIHSTVFPYFFRWQNSHGKVFIYWLGTEPFLYIADPEFLKKMSTEVLAKRWGKPRVFRHDRDPMFGNGLVMVEGNEWVRHRHVIAPAFSPLNLKAMASMMTESTNQMIDRWIAQINSGNPEIDVEREVVETAGEIIAKTSFGMKGKNAKEVSEKLRALQMTLFKTTRYVGVPFGKCFNVKKTLEAKKLGKEIDKLLLSVITSRMKSIKRQTQEDLLGLLLQGNNHQGDGKLGKTFTTRDLLDECKTFFFAGHETTALAISWTLLLLAINEDWQIQLRDEIREVVGDKELDINVLAGLRKMKWVMNEVLRLYPTAPNVQRQAREDIKVDNLTVPNGTNMWIDVVAMHHDPALWGKDVNDFRPERFMNDVNGGCNHKMGYLPFGFGGRMCVGRNLSFMEYKIVLTLLLSRFSFKVSPGYNHAPSIMLSLRPTYGLHLIVQPL* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1505 512 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 453 462 IPR017972 GO:0005506|GO:0016705
Gso16g1505 512 SUPERFAMILY Cytochrome P450 72 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1505 512 PRINTS P450 superfamily signature 322 339 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1505 512 PRINTS P450 superfamily signature 374 385 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1505 512 PRINTS P450 superfamily signature 451 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1505 512 PRINTS P450 superfamily signature 460 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1505 512 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 7 507 - -
Gso16g1505 512 PANTHER CYTOCHROME P450 FAMILY MEMBER 7 507 - -
Gso16g1505 512 Pfam Cytochrome P450 77 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1505 512 Gene3D Cytochrome P450 29 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1505 512 PRINTS E-class P450 group I signature 86 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1505 512 PRINTS E-class P450 group I signature 311 328 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1505 512 PRINTS E-class P450 group I signature 331 357 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1505 512 PRINTS E-class P450 group I signature 373 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1505 512 PRINTS E-class P450 group I signature 450 460 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1505 512 PRINTS E-class P450 group I signature 460 483 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1505 Gso-Chr16 35304253 35308049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1505 8 512 Cytochrome P450 AT5G52400 59.687 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1505 - - gmx:100810679 986.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1505 16 35304253 35308049 Gso9g1132 9 32420185 32423962 GST
Gso16g1505 16 35304253 35308049 Gso20g1282 20 42878151 42881487 PCT
Gso16g1505 16 35304253 35308049 Gso10g2096 10 47939193 47942789 PCT
Gso20g1281 20 42866089 42868756 Gso16g1505 16 35304253 35308049 PCT
Gso10g2097 10 47957126 47959409 Gso16g1505 16 35304253 35308049 PCT