Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1498 ATGGATTCAAAGCGATTCGATCGCGCGAGTTGCAAGGTTCGGGTCGTCACCAGGATCCGCGGGTTTGCGGGTCCCGAGGCTAATTCCGAACCTGCCGCTTCCAGAACGGTGGAGTGGGTTTCGGTGAACCGCGAAAATTTGGAGGATGTCACCATCTCCTTCGGAGACCAATCTTCCAGTCTGTATTCAGTGGACTATTGCTATAAGGAAGATGAAGATAATGAATTGATATATTCAAGGGAGGTGAAGCCTCTTGTGTCTGCAGCTTTTGATGGTCATAACAGCACTGTTATTGCACATGGTGCTAGGGGTAGTGGAAAGACGCACGTAATTCAGGGCTCTGCTGAGAGACCGGGTTTGGCAGTGCTTGCTATCGCTGAGTTTCTTTCAGTGGCTGAGAAAAATGGGAAATCCATAGCTGTTTCTTTCTATGAGGTTGATCATCAGGAGCGGGCCATGGATTTATTAAATCCAGAAAAGCCACCAATTTTGGTTTTTGAAGATCGTGGCAGAATTCAGTTTAAAGGACTAACTCAGGTTCTTGTGAAATCCATTGCTGAATTTCAGAATTTGTACTCCTCTGCATGTTTTGCACTGAAGGGAGCTCCCAAAAAAGGAGGATGTGAACATGTTCATAGAAGCCACATGGGATTAATCGTCCATGTCTTTTCCCAGAATGGAAGTCTTGTAAGCAAAGTGAATTTTGTTGACTTGGCAGGTTATGAAGATGCTAGAAAGAAAAGTAGTGATGGATCCTACCTTGCTGAGATTAACAAAATTAACAAGTCAATTTATGCCTTATTGAATGTTTGTCATGCTTTGAGTACAAATGAAAGTCGTGTTGCCTACCGGGAAAGCAAAATTACACGCATGCTGCAGGATTCGTTGAGGGGGACTAGCAAAATTTTATTGGTTTCATGCTTGAACCCATCATTTTGCCAAGACACTATTTACATGGTTAGCTTGGCATCACGGTCATGTCATTGGATTCATCGGGCATTCTTAGATTCCACCAAGAGAAATGCAAGTTCAGCAAAACAAATGGTGAATTCTCATAAGAACCAGATACCCAAAAGTGTTTCAGGAACAGCAAAGAAATTACATGTTTCTTCTAAATTACTTGATAAAAAAGTTGTTGTTGCTAAGAAGTCTGCAATAAAAGGAAGGAAATTGTTTGATGAAGCCAGTCACTCTGTTACTAAAGCTGAGAAGGAAATTGCTGTTGCCCAAGTTACTCAAGCATCAAAGCCTTTATTGGACAATTCATTGTTGGAAACTGGAAGTGATGTCGTACTCAACTCTGGAATGGAAAAGAAGACTGGAAATCATGTTGTACTCAACTCTGGAATGGAAAAGAAGACCAGAAATCATGTTGTACTCAACTCTGGAGTGGAAAAGGATGACTCATTTTCAAAAGCTAGAGAGAACGTGAAACTTGATCTGATGGTGCAAAATGATGATTCATCTTTTAATGCTAACATTGAAGTGGAACTTAATCCCCTAGCAGATCAGGGTATTTCGGTGGATGAGGAGGATCATCAAAAGGAGCATACTCCTTATGCTAGTAATTACTCTGAAGCATTGGCAAAAATAGTTCAGGAAGACCATAGCATAAACAAGGAGAACAACAATTCAAGGGCAATCAGAGATGATTCATTGGCTATTAATTCACCACCTATCAGTTCTCAGTTGCAGGATCTTTCCAATAGTCTTAAAATGCTATATTCTTCAACCCCATCATGCATGCAGATACCAAAAACGGAACCCATTCCACTTGATATTGTTGAACCAAAAACTCCAACAATTGAACAAAACATGAGCATTAACAGATGGGATGCAATGAATGCCAAAAGTCCCTGGGAGACATTCAGCATGCGAGGTTCTGGAATGAAGAGTTCTCTTGTTCAAGAATACCTCAGGTTTTTAAATACAGCTAACAAGGAGGAATTAAAAAAATTGAAGGGAATCGGGGAGAAGAGAGCTACCTTCATACTTGAACTCCGAGAAGAATCTCCAGAGCCTTTCAAGAGTCTGGATGATTTGAAGGATATTGGGCTTTCGGCAAAGCAGGTTAAAGGAATAATGAAGAAGGAAGTCGGAGAGCTTTTCAGTTAG 2115 0.4109 MDSKRFDRASCKVRVVTRIRGFAGPEANSEPAASRTVEWVSVNRENLEDVTISFGDQSSSLYSVDYCYKEDEDNELIYSREVKPLVSAAFDGHNSTVIAHGARGSGKTHVIQGSAERPGLAVLAIAEFLSVAEKNGKSIAVSFYEVDHQERAMDLLNPEKPPILVFEDRGRIQFKGLTQVLVKSIAEFQNLYSSACFALKGAPKKGGCEHVHRSHMGLIVHVFSQNGSLVSKVNFVDLAGYEDARKKSSDGSYLAEINKINKSIYALLNVCHALSTNESRVAYRESKITRMLQDSLRGTSKILLVSCLNPSFCQDTIYMVSLASRSCHWIHRAFLDSTKRNASSAKQMVNSHKNQIPKSVSGTAKKLHVSSKLLDKKVVVAKKSAIKGRKLFDEASHSVTKAEKEIAVAQVTQASKPLLDNSLLETGSDVVLNSGMEKKTGNHVVLNSGMEKKTRNHVVLNSGVEKDDSFSKARENVKLDLMVQNDDSSFNANIEVELNPLADQGISVDEEDHQKEHTPYASNYSEALAKIVQEDHSINKENNNSRAIRDDSLAINSPPISSQLQDLSNSLKMLYSSTPSCMQIPKTEPIPLDIVEPKTPTIEQNMSINRWDAMNAKSPWETFSMRGSGMKSSLVQEYLRFLNTANKEELKKLKGIGEKRATFILELREESPEPFKSLDDLKDIGLSAKQVKGIMKKEVGELFS* 705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1498 704 Gene3D - 630 702 - -
Gso16g1498 704 PANTHER KINESIN-LIKE PROTEIN KIN-10C 12 588 - -
Gso16g1498 704 PANTHER KINESIN-LIKE PROTEIN KIN-10C 593 701 - -
Gso16g1498 704 SMART kinesin_4 10 337 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g1498 704 Coils Coil 335 355 - -
Gso16g1498 704 Gene3D Kinesin motor domain 1 328 IPR036961 -
Gso16g1498 704 Pfam Kinesin motor domain 37 325 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g1498 704 PANTHER KINESIN-RELATED 12 588 IPR027640 GO:0003777|GO:0007018
Gso16g1498 704 PANTHER KINESIN-RELATED 593 701 IPR027640 GO:0003777|GO:0007018
Gso16g1498 704 SUPERFAMILY RuvA domain 2-like 633 697 IPR010994 -
Gso16g1498 704 PRINTS Kinesin heavy chain signature 92 113 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g1498 704 PRINTS Kinesin heavy chain signature 232 250 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g1498 704 PRINTS Kinesin heavy chain signature 281 302 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso16g1498 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 325 IPR027417 -
Gso16g1498 704 Pfam Helix-hairpin-helix motif 642 690 - -
Gso16g1498 704 ProSiteProfiles Kinesin motor domain profile. 12 329 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1498 Gso-Chr16 35213643 35219019 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1498 62 311 Calmodulin-binding Proteins AT5G65930 29.749 3.40e-26 113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1498 16 35213643 35219019 Gso16g1498 16 35213643 35219019 ECH
Gso16g1498 16 35213643 35219019 Gso9g1117 9 32161766 32166907 GST