Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1485 ATGGCAGGCGAGGTGGTGAAGAAGGAAGACTCTCTCAACCTGAAAGTCACTAACAAGAGTCATGTTCAACCTGAGGAGAAAATTGGAAGGAAAGAGTACCAGCTGGTCACTTTTGATCTTCCCTACTTGGCCTTCTACTACAACCAGAAGCTGCTGTTTTACAAGGGTGAAGATTTTGAGGGTATGGTCCAAAAACTCAAAGTTGGACTTGGTGTGGTGCTGAAGGAATTTCACCAACTTGCTGGTAAGTTAGGGAAAGATGAAGAGGGGGTGTTCAGAGTGGAGTATGATGATGACATGCTTGGTGTGGAGGTTGTTGAAGCTGTTGTTGTTGATGATAATGAGATTGGTGTGGATGATCTAACTGTGGCTGAAATTAGTAACACTAATTTGAAGGAGCTGATACCTTATAGTGGTATCTTGAATTTGGAAGGCATGCATAGGCCTTTGCTGGCTGTTCAGTTAACGAAGCTCAAAGATGGGCTTGCAATGGGCCTAGCATTCAACCATGCTGTCTTGGACGGTACTGCCACCTGGCAATTCATGACCTCATGGGCCGAGATCTGCAGCGGTTCACCCTCCACGTCAGCACCACCCTTCCTGGACCGAACCAAGGCCCGGAACACACGCGTGAAATTGGACCTCTCGCTTCCTGAGCCCAACGGCCCACCAACTTCCAACGGTGAGGCAAAGCCCGCGCCAGCACTTAGGGAAAAGATCTTCAAATTCTCCGAGTCAGCCATCGACAAGATCAAGTCAACGGTCAACGAGAACCCTCCATCCGATGGCTCAAAACCATTCTCAACATTTCAGGCTCTTTCCTCCCACGTTTGGCGCCATGTAAGCCATGCACGTAACTTGAAGCCAGAGGACTACACGGTGTTCACTGTCTTCGCCGATTGTCGGAAGCGGGTGGACCCACCAATGCCGGAGAATTATTTCGGAAACCTAATTCAAGCTATTTTTACCGTTACAGCGGTTGGGCTATTAGCCGCCCATCCGCCACAATTTGGGGCTTCATTGATCCAGAAAGCCATTGAAGCCCACAATGCTAAGGCAATTGATGAACGTAACAAGGAGTGGGAGAGTACACCCAAAATTTTTCAATTCAAAGATGCTGGGGTGAATTGTGTGGCTGTTGGAAGCTCCCCAAGGTTTAAGGTTTATGACATTGATTTTGGGTGGGGGAAGCCAGAGAATGTGAGGAGTGGAACTAATAACAAGTTTGATGGGATGATTTATTTGTACCCGGGGAAGAGTGGAGGGAGGAGCATTGATGTGGAACTAACCTTGGAGCCTGAGGCTATGGAGAGGTTGGAGCAAGACAAGGATTTTCTTTTGGAAGCATGA 1350 0.4807 MAGEVVKKEDSLNLKVTNKSHVQPEEKIGRKEYQLVTFDLPYLAFYYNQKLLFYKGEDFEGMVQKLKVGLGVVLKEFHQLAGKLGKDEEGVFRVEYDDDMLGVEVVEAVVVDDNEIGVDDLTVAEISNTNLKELIPYSGILNLEGMHRPLLAVQLTKLKDGLAMGLAFNHAVLDGTATWQFMTSWAEICSGSPSTSAPPFLDRTKARNTRVKLDLSLPEPNGPPTSNGEAKPAPALREKIFKFSESAIDKIKSTVNENPPSDGSKPFSTFQALSSHVWRHVSHARNLKPEDYTVFTVFADCRKRVDPPMPENYFGNLIQAIFTVTAVGLLAAHPPQFGASLIQKAIEAHNAKAIDERNKEWESTPKIFQFKDAGVNCVAVGSSPRFKVYDIDFGWGKPENVRSGTNNKFDGMIYLYPGKSGGRSIDVELTLEPEAMERLEQDKDFLLEA* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1485 449 Gene3D - 11 215 IPR023213 -
Gso16g1485 449 Pfam Transferase family 14 445 - -
Gso16g1485 449 Gene3D - 219 442 IPR023213 -
Gso16g1485 449 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 16 445 - -
Gso16g1485 449 PANTHER BAHD ACYLTRANSFERASE DCR-RELATED 16 445 - -
Gso16g1485 449 MobiDBLite consensus disorder prediction 214 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1485 Gso-Chr16 35035715 35039590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1485 64 448 Monolignol Biosynthesis Gene Families AT5G48930 27.340 7.60e-37 138
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1485 K19747 - gmx:100790669 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1485 16 35035715 35039590 Gso16g1485 16 35035715 35039590 ECH
Gso16g1485 16 35035715 35039590 Gso9g1103 9 31830628 31834359 GST