Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1477 ATGGAGACTCAAAAGCTAATTATACATTTCATTCTTCTTCTTCTTTTCATTTCTTGTTCATCCTCTTTCACTCCCATAGATAACTACCTTCTTAGCTGTGGATCACAGAACAATGCTTCCCTCTTCAACCGCATCTTCGTCAGTGATTCCACCAGCCATGGCTCAATTTTTCTCTCTGCTGACAAATCCATTTCCCTCACCTACCAAGACCCTCCTCCAAATTTGCCTACTTTGTACCACACTGCAAGAGTTTTCCCCATCACTGGGAGCTACAGGTTCAACATGAGGATAAATGGTACCCACTTGGTTCGTTTTCATTTTTCACCTTTTAAGGCTCAAGGATTTGATCTAAAATCTGCCAACTTTAGTGTCTTGGTTGATGGTAATTTGGTGCTGAGAAATTTCAAGCCAATTAATGGTGCACTGCTTAAGGAGTTTATTTTGAAGATAGAGTCAAATTTGCTTGAAATTTTATTTAGACCTGAAGGTAATTCAGGTTTTGGCTTTGTGAATGCTGTAGAGGTGTTTACTGCTCCTGCTGATTTTGTCATAGATTATGGAGCTAGGTTGGTTGGTCCTTCTGGTGTGGTAGAGTACAAGAACCTTTCATCTCAGGTTTTGGAAACTGTGCATAGGATTAATGTTGGGGGTGTGAAAGTAACTCCTTTTAATGACACCCTTTGGAGGACTTGGATTCCTGATGAGGAATTTCTGGTTCTTAAGGATGCTGCTAAGCGTGTGGGGAGCACTCACACACTAAATTACCAGAAGGGAGGCGCGACTCGAGAGATCGCTCCGGATAATGTTTATATGACTGCTCAGGAAATGAATAAGGATCACTCCATTATTGCTTCACAGTTCAACATAACCTGGGATTTTCCAGTGGCTCCAGGTGGTGTTCGGCACTTGGTTCGGCTGCATTTCTGTGATATTGTTAGTCCTGCTCTTAATTTGCTCTACTTTGATGTGTATATCAATGGGTATTATGCTTACAAGGATCTTGATTTGTCATCCCTTACTGTCCATGTGCTTGCATCTCCGTTCTATGTGGATTTTGTTGTAGATTCCAATGAATTGGGTGTTATTCAAATAAGTGTTGGCCCTTCTGAACTGAGTAGTTCTGCAAGGATGAATGCCATTTTGAATGGTGTAGAGATAATGAAGCTAGTGAATGTTGTGGACTCACATGTTGTTCCAAGGAAGAAGAGGTTGTGGGTGTTGGTGAGTTCAATTGTTGGAGGAATTGTTGTTTTGCTTTTTGTTATAGCTGCTTTGCTGCTTTCTCTCAAATGCAGGAAGAAGAAGAAAACGCCAAGACAAAGAACAATGGAAAGTGTAGGATGGACGCCTTTACGCGTGTACGGAGGGAGTTCACTTAGTAGAATGTCTGAAGGGACAGCTTTTCCCTCTCCTGGTTCTTATGGTTATTTTGGCTTGACAATCCCTTTTGCCGATATACAATCAGCAACAAACAATTTTGATAGAAGTCTAATTATAGGGTCTGGTGGGTTTGGTATGGTTTACAAAGGGGTGCTCAAAGACAACGTGAAGGTTGCAGTCAAGAGAGGCATGCCTGGATCCAGACAAGGGCTTCCAGAATTCCAGACCGAAATAACAATCTTTTCCAAAATTCGCCATCGCCATCTTGTTTCACTAGTTGGATATTGTGAAGAAAACTCAGAAATGATACTTGTCTATGAGTATGTGGAAAAAGGTCCACTCAAAAAGCATCTATATGGCTCAGCAGGACATGCACCTTTGTCTTGGAAGCAGCGGCTTGAGATATGCATTGGTGCAGCTAGAGGTCTCCACTATCTACACACTGGTTTCGTGCAAGGAATCATCCACCGTGACATTAAATCAACCAATATTTTGCTTGATGAAAACTATGTGGCCAAGGTTGCAGATTTTGGTCTTTCAAGATCTGGACCTTGTCTCAATGAAACCCATGTGAGCACTGGTGTGAAAGGTAGTTTTGGTTATCTTGATCCGGAGTATTTTCGAAGGCAGCAGCTTACAGATAAGTCAGATGTTTACTCATTTGGGGTGGTGCTTTTTGAGGTTCTTTGTGCCAGACCTGCTGTTGATCCACAACTTGATAGGGAACAGGTGAACTTAGCCGAATGGGGGCTTGAATGGCAGAAAAAGGGCATGCTGGAGCATATTATTGATCCCTATCTTGTTGGGAAGATAAAGCAAAGCTCTTTGAAGAAGTTTGGTGAAACAGCAGAAAAATGTCTGGCTGAATATGGTGTTGATAGGCCAACAATGGGTGCTGTATTGTGGAATTTGGAATATGCACTTCAGCTCCAAGAAAGTGAACAAGAAGGGGAGTCATATGATGATAGCAGTGCTCGGGAAACAGTGAATGTGACAACTACAATAATTCCTGGGAGTCCTTCTAGTAACGTAATAAGAGAGGGAGATAATGGTAATGGTTATTCAGACATAAGTGCTACCGAAGTTTTTTCTCAACTAATGAACAGTGAAGGCAGATAG 2499 0.4182 METQKLIIHFILLLLFISCSSSFTPIDNYLLSCGSQNNASLFNRIFVSDSTSHGSIFLSADKSISLTYQDPPPNLPTLYHTARVFPITGSYRFNMRINGTHLVRFHFSPFKAQGFDLKSANFSVLVDGNLVLRNFKPINGALLKEFILKIESNLLEILFRPEGNSGFGFVNAVEVFTAPADFVIDYGARLVGPSGVVEYKNLSSQVLETVHRINVGGVKVTPFNDTLWRTWIPDEEFLVLKDAAKRVGSTHTLNYQKGGATREIAPDNVYMTAQEMNKDHSIIASQFNITWDFPVAPGGVRHLVRLHFCDIVSPALNLLYFDVYINGYYAYKDLDLSSLTVHVLASPFYVDFVVDSNELGVIQISVGPSELSSSARMNAILNGVEIMKLVNVVDSHVVPRKKRLWVLVSSIVGGIVVLLFVIAALLLSLKCRKKKKTPRQRTMESVGWTPLRVYGGSSLSRMSEGTAFPSPGSYGYFGLTIPFADIQSATNNFDRSLIIGSGGFGMVYKGVLKDNVKVAVKRGMPGSRQGLPEFQTEITIFSKIRHRHLVSLVGYCEENSEMILVYEYVEKGPLKKHLYGSAGHAPLSWKQRLEICIGAARGLHYLHTGFVQGIIHRDIKSTNILLDENYVAKVADFGLSRSGPCLNETHVSTGVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVLCARPAVDPQLDREQVNLAEWGLEWQKKGMLEHIIDPYLVGKIKQSSLKKFGETAEKCLAEYGVDRPTMGAVLWNLEYALQLQESEQEGESYDDSSARETVNVTTTIIPGSPSSNVIREGDNGNGYSDISATEVFSQLMNSEGR* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1477 832 Pfam Malectin-like domain 31 388 IPR024788 -
Gso16g1477 832 SUPERFAMILY Protein kinase-like (PK-like) 477 762 IPR011009 -
Gso16g1477 832 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 16 797 - -
Gso16g1477 832 SMART serkin_6 493 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1477 832 ProSiteProfiles Protein kinase domain profile. 493 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1477 832 CDD STKc_IRAK 499 765 - -
Gso16g1477 832 Pfam Protein tyrosine and serine/threonine kinase 498 757 IPR001245 GO:0004672|GO:0006468
Gso16g1477 832 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Gso16g1477 832 Gene3D Transferase(Phosphotransferase) domain 1 569 792 - -
Gso16g1477 832 Gene3D - 28 180 - -
Gso16g1477 832 Gene3D - 206 390 - -
Gso16g1477 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Gso16g1477 832 Gene3D Phosphorylase Kinase; domain 1 473 568 - -
Gso16g1477 832 ProSitePatterns Protein kinases ATP-binding region signature. 499 521 IPR017441 GO:0005524
Gso16g1477 832 PANTHER OS07G0166700 PROTEIN 16 797 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1477 Gso-Chr16 34940735 34943892 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1477 6 832 Receptor kinase-like Gene Family AT3G46290 49.061 0.0 751
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Gso16g1477 Malectin_like 9.9e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1477 - - gmx:100787484 1610.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1477 16 34940735 34943892 Gso9g1094 9 31403475 31406348 GST
Gso16g1477 16 34940735 34943892 Gso20g1304 20 43068801 43072008 PCT
Gso16g1477 16 34940735 34943892 Gso10g2070 10 47666810 47670067 PCT
Gso20g1304 20 43068801 43072008 Gso16g1477 16 34940735 34943892 PCT
Gso10g2070 10 47666810 47670067 Gso16g1477 16 34940735 34943892 PCT