Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1391 ATGGCCGAAGTGATCAATAACATGCCTCTTGAATCCCTCGACCAATCTCCCTCCTCTTCAGCTCCTCCTCCACCTCCTCCTCTGCCACCCACCTCCTCCTCCGCCACCCGCCTCTTCCTCCGCCCCCGCCGCCTCTCCCTCCTCCGTCGCGCTGCCGGGACCGCAGGGACGACCGCGACTTTGACCGCCACCCTAACCGCAATCGGGATTACTACGACCGCGACAGGGACTTCAAGCGTTGTCGCAGCCCTAGTCCCTACTACCACGGCCGACGATACTCTCCTCCACCACCTTCACGCCGGTCGCCTCCGCTGTACAAGCGATCCCAGAGAGGAAGCCCCCGCGGCGGGGCCTATGGACCCGATGATAGGTGTGATTCGAGCTTTTGTCCTGGTTGAAGAGAAAGAAGAACTTGAAATTACAGATAGAGTATTCTTGGATGTTGATATTGATGGACAGCGTTTAGGTAGGATTCTCATTGAATTATATGGCAAAGTTCTACCAAAAACTGTGGAGAATTTTAGAGCTTTGTGCACAGGGGAGAAAGGAAAGAATGCCAGTGGTATAAAACTTCATTACAAAGGAATACCATTTCATAGGATAATATCAGGTTTCATGATTCAGGGCGGTGACATTGTTCATCATGATGGTAGAGGATATGAATCAATTTATGGTGGCACCTTTCCTGATGAGAATTTCAAGATAAACCATTCTCATGCTGGTGTAGTCTCTATGGTGAATTCAGGTCTTGATTCCAATGGCTCACAGTTTTTTATTACAACAGTGAAGACCAGTTGGTAA 801 0.4994 MAEVINNMPLESLDQSPSSSAPPPPPPLPPTSSSATRLFLRPRRLSLLRRAAGTAGTTATLTATLTAIGITTTATGTSSVVAALVPTTTADDTLLHHLHAGRLRCTSDPREEAPAAGPMDPMIGVIRAFVLVEEKEELEITDRVFLDVDIDGQRLGRILIELYGKVLPKTVENFRALCTGEKGKNASGIKLHYKGIPFHRIISGFMIQGGDIVHHDGRGYESIYGGTFPDENFKINHSHAGVVSMVNSGLDSNGSQFFITTVKTSW* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1391 266 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 148 265 IPR002130 GO:0000413|GO:0003755
Gso16g1391 266 MobiDBLite consensus disorder prediction 1 36 - -
Gso16g1391 266 Gene3D - 129 266 IPR029000 -
Gso16g1391 266 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 118 266 - -
Gso16g1391 266 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 162 177 IPR002130 GO:0000413|GO:0003755
Gso16g1391 266 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 198 210 IPR002130 GO:0000413|GO:0003755
Gso16g1391 266 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 241 256 IPR002130 GO:0000413|GO:0003755
Gso16g1391 266 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 256 266 IPR002130 GO:0000413|GO:0003755
Gso16g1391 266 SUPERFAMILY Cyclophilin-like 139 266 IPR029000 -
Gso16g1391 266 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 145 266 IPR002130 GO:0000413|GO:0003755
Gso16g1391 266 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 118 266 - -
Gso16g1391 266 MobiDBLite consensus disorder prediction 18 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1391 Gso-Chr16 33812031 33813983 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1391 156 259 U-box Gene Family AT5G67530 49.524 1.02e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1391 - - gsj:114390000 427.943