Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1363 ATGGTGAAGTACTCAAGGGAGCCTGACAATCCAACTAAGTCTTGCAAGGCTAGAGGCGCCGACCTTAGGGTTCATTTTAAGAACACAAGGGAAACTGCCTTTGCAATCAGGAAGTTGCCCTTGGTCAAGGCTAAAAGGTACTTGGAAGATGTTCTTGCCCACAAGCAGGCAATTCCATTCAGACGTTTTTGTCGAGGTGTTGGAAGGACAGCCCAGGCTAAGAATAGACACTCTAATGGCCAAGGACGGTGGCCTGTCAAGTCAGCAAAATTCATTCTTGATTTGCTCAAAAATGCTGAGAGCAATGCTGAAGTGAAAGGTTTGGATGTTGATGCACTGTACATTTCGCATATCCAAGTCAATCAAGCACAGAAGCAAAGACGCCGAACATACCGAGCCCATGGAAGAATCAATCCTTATATGTCATCTCCGTGCCACATAGAGTTAATATTATCTGAAAAAGAAGAAGATTTTATTTCATTTGCCACACCAAATACAAGAGTATGA 507 0.4339 MVKYSREPDNPTKSCKARGADLRVHFKNTRETAFAIRKLPLVKAKRYLEDVLAHKQAIPFRRFCRGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEDFISFATPNTRV* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1363 168 Gene3D Ribosomal protein L22/L17 1 157 IPR036394 GO:0003735|GO:0005840|GO:0006412
Gso16g1363 168 TIGRFAM uL22_arch_euk: ribosomal protein uL22 4 154 IPR005721 GO:0003735|GO:0006412|GO:0015934
Gso16g1363 168 Pfam Ribosomal protein L22p/L17e 17 152 IPR001063 GO:0003735|GO:0005840|GO:0006412
Gso16g1363 168 PANTHER 60S RIBOSOMAL PROTEIN L17-1 ISOFORM X1 1 157 - -
Gso16g1363 168 Hamap 50S ribosomal protein L22 [rplV]. 2 154 IPR005721 GO:0003735|GO:0006412|GO:0015934
Gso16g1363 168 SUPERFAMILY Ribosomal protein L22 1 154 IPR036394 GO:0003735|GO:0005840|GO:0006412
Gso16g1363 168 CDD Ribosomal_L22 15 151 IPR001063 GO:0003735|GO:0005840|GO:0006412
Gso16g1363 168 PANTHER 60S RIBOSOMAL PROTEIN L17 1 157 IPR005721 GO:0003735|GO:0006412|GO:0015934
Gso16g1363 168 ProSitePatterns Ribosomal protein L22 signature. 127 151 IPR018260 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1363 Gso-Chr16 33222570 33223123 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1363 1 156 Cytoplasmic Ribosomal Protein Gene Family AT1G27400 92.308 2.21e-108 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1363 K02880 - gmx:100816536 317.775