Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1358 ATGATCATGAGTTTAGAGCCTTCTGGGGAGGAACAGGAAAAGTTTAGGTCAAATTTTAAGATTATCTCTTCCTCATTTGCCTCTTTGCCATTTAAACTTCCAGGGACAGCATTCCATCGTGGTATCAAGGCTCGGGATAGGATGTATGAGATGTTGGATTCTACAATTTCGCGGAGGAGAAGTGGCCAAGAATTTCAGCAGGATTTCTTAGGATCCTTAGTTATGAAACATAGCAAAGAAGATGGAGAAGAAGATGAAAATAAACTCACAGATAAACAATTGAAGGATAATATATTAACTCTGCTGGTTGCAGGCCATGATACCACAGCAGCTGCTCTTACATGGCTCATCAAATTTCTTGGTGAAAATCCAATTGTTTTGGAACAATTGAGAGAGGAACACAGACAAATTGTCATCAACAGAAAGAGTGGAACAGATCATACTTGGGCTGAAGTTAATAACATGCCTTACACGGCTAAAGTGATCAGCGAAACACTTCGAAGAGCCACAATACTACCTTGGTTTTCAAGAAAGGCATCCCAGGATTTTGAAATTGATGGTTATAAAATTAAGAAAGGTTGGTCTGTCAACCTAGATGTTGTTTCTATACACCATGACCCCGAAGTTTTCCCAGATCCTGAAAAGTTTGATCCCTCTAGATTTGATGAAACCCTGAGGCCTTTCAGTTTTCTTGGATTTGGTAGTGGACCACGCATGTGTCCTGGAATGAACCTTGCCAAGCTAGAAATTTGTGTTTTCATCCATCATCTTGTCAACAGATACAATTGGAGACCTCTGGAGAAAGACAATTCTGTGCAACCAACGCTTGTAAGGATGCCAAAGAACAAGTATCCTATTATAGTTGAAGCACTAGGACACGATTCCTCCAGAAACTACAAACAAACAACAGAAGAAAAGATAGCACAGAAAAATGTTGTATATGAACAGAATCATTGTATCTTTATTGTTGCTGCATGGAGAGAAATTATGAACCAAATCATGCTTTATTACTTGTGA 1017 0.3904 MIMSLEPSGEEQEKFRSNFKIISSSFASLPFKLPGTAFHRGIKARDRMYEMLDSTISRRRSGQEFQQDFLGSLVMKHSKEDGEEDENKLTDKQLKDNILTLLVAGHDTTAAALTWLIKFLGENPIVLEQLREEHRQIVINRKSGTDHTWAEVNNMPYTAKVISETLRRATILPWFSRKASQDFEIDGYKIKKGWSVNLDVVSIHHDPEVFPDPEKFDPSRFDETLRPFSFLGFGSGPRMCPGMNLAKLEICVFIHHLVNRYNWRPLEKDNSVQPTLVRMPKNKYPIIVEALGHDSSRNYKQTTEEKIAQKNVVYEQNHCIFIVAAWREIMNQIMLYYL* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1358 338 PANTHER CYTOCHROME P450, FAMILY 722, SUBFAMILY A, POLYPEPTIDE 1 1 286 - -
Gso16g1358 338 SUPERFAMILY Cytochrome P450 9 288 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1358 338 PRINTS E-class P450 group I signature 93 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1358 338 PRINTS E-class P450 group I signature 113 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1358 338 PRINTS E-class P450 group I signature 159 177 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1358 338 PRINTS E-class P450 group I signature 199 223 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1358 338 PRINTS E-class P450 group I signature 230 240 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1358 338 PRINTS E-class P450 group I signature 240 263 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1358 338 PANTHER CYTOCHROME P450 26 1 286 - -
Gso16g1358 338 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 233 242 IPR017972 GO:0005506|GO:0016705
Gso16g1358 338 Pfam Cytochrome P450 30 280 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1358 338 PRINTS P450 superfamily signature 104 121 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1358 338 PRINTS P450 superfamily signature 160 171 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1358 338 PRINTS P450 superfamily signature 231 240 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1358 338 PRINTS P450 superfamily signature 240 251 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso16g1358 338 Gene3D Cytochrome P450 1 291 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1358 Gso-Chr16 33105883 33107915 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1358 12 271 Cytochrome P450 AT5G45340 43.846 1.39e-72 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1358 - - gsj:114391259 690.649