Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1353 ATGGACCCGAAGTTCATCGGAAAGCCGCTGGCGATGGTGGACCTGGACCGGGACCGGATGTCGGAGCGTGGGTCCCACCACCGGCGTTCCCACTCCGACACCTCCTTCCGCTTCCCTGCCAACTTCGACGAGCTTCTCCTCTTCGACCCCTCCGACCTCGACATCTCCGGCCTCCCGTCGCCGCTCCCTCTGCCGTCGCAGGGCGCCGGCGGCGTGGTTCCGATGTCCGTCGTCTCCGAGGAGTCTGGCGGACGGCCGAGGCCGTCCGGGGCTTCCGCCGGCGGGCACCTGCGGAGTCTGTCGGTGGATTCTGACTTCTTCGATGGGCTCGGGTCCGGCGTCGGCGGCGATGAGAGAGGTGCCGGGAATGGCGGCGGCGAGCGGCACAGCAACTCGATGGAGGGGTCGTCGACGACGTCGTTTGAGGCGGACTCGGCGACGATGATGGATGGCATGAAGAAAGCTACGGCCCCTGATAAACTTGCTGAGCTTGCTCTTACGGATCCCAAAAGAGCTAAGAGGATGCTTGCTAACAGGCAATCTGCTGCAAGATCTAAGGAGAGGAAGATTCGTTACACAAGTGAGTTGGAGAAGAAGGTGCAGACTCTTCAGACTGAAGCAACTAACCTTTCTGCACAGCTTACCATGCTTCAGAGAGACACTACAGATTTGACTGCACAGAATAAGGAGCTCAAACTGCGCTTACAGGCTTTTGAGCAAGAAGCACAGCTTAGAGAAGATCTCAATGAGGCATTGAAGAAAGAACTGCAGCGCCTTAGGGTACAAAGTGCTTGCTGGGGTGCTATGACTGGTGGTAACCCTTCTTTTGGTGGGATATTCAACCAGTTGGCTTCCCAGTTAGCCATGCAACAGTTGTCTAATTCTGTGTCCCATCAGCACCAGACACAACACCAGCCACAGGTTGGCATGCCTCCTCCCCCCTCTGGACAGAAGCACCCTAAGTTCATGGACTTCAATCAGCAGAAGTAG 990 0.5737 MDPKFIGKPLAMVDLDRDRMSERGSHHRRSHSDTSFRFPANFDELLLFDPSDLDISGLPSPLPLPSQGAGGVVPMSVVSEESGGRPRPSGASAGGHLRSLSVDSDFFDGLGSGVGGDERGAGNGGGERHSNSMEGSSTTSFEADSATMMDGMKKATAPDKLAELALTDPKRAKRMLANRQSAARSKERKIRYTSELEKKVQTLQTEATNLSAQLTMLQRDTTDLTAQNKELKLRLQAFEQEAQLREDLNEALKKELQRLRVQSACWGAMTGGNPSFGGIFNQLASQLAMQQLSNSVSHQHQTQHQPQVGMPPPPSGQKHPKFMDFNQQK* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1353 329 MobiDBLite consensus disorder prediction 291 329 - -
Gso16g1353 329 Gene3D - 169 223 - -
Gso16g1353 329 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 168 231 IPR004827 GO:0003700|GO:0006355
Gso16g1353 329 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 7 327 - -
Gso16g1353 329 MobiDBLite consensus disorder prediction 291 306 - -
Gso16g1353 329 CDD bZIP_plant_RF2 171 220 IPR044759 GO:0003700|GO:0006355
Gso16g1353 329 Coils Coil 193 262 - -
Gso16g1353 329 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 7 327 - -
Gso16g1353 329 Pfam bZIP transcription factor 170 228 IPR004827 GO:0003700|GO:0006355
Gso16g1353 329 MobiDBLite consensus disorder prediction 77 140 - -
Gso16g1353 329 SUPERFAMILY Leucine zipper domain 170 222 IPR046347 GO:0003700|GO:0006355
Gso16g1353 329 SMART brlzneu 166 230 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1353 Gso-Chr16 33044812 33049283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1353 22 328 bZIP Transcription Factor Family AT1G43700 48.512 9.06e-72 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso16g1353 bZIP_1 1.6e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1353 K20557 - gmx:100101886 583.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1353 16 33044812 33049283 Gso2g0680 2 7127798 7133270 GST