Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1352 ATGCTTAGGAACATGGATGCACAAGCCAAGAAAAAAGCATTGTTTCGTGCTAAATTGAATGCCCAGAAGAAGGAAAAGCGCATAGAATCTCCCCTTGTAAGGTATAATGAATTTGATCAACCTGTTTGCCGGGTTTGTGATGTTGTTCTAAAGTCTGAGTCTTTATGGGATGCACACCAAGTTTCTCGTAAGCATCGTGAGGCAATAAGTAGTCTGAAAGCGAATGCAGCTGGATTAACTCAGCATAACAATGCAAAGCCTGTTGCTGATGCCAGCTTTTCCAAGGCTAAACCAGAACATTCTTTGGACTCACAATTCAAACCGCCAGAAGCTTCACAACTAGTTTCTAAACCTCAATCATCATCGGTGCTTCCACCAGGATTTTTTGATGACAGCGGTTCAGGAAAAACAAAATCTGAACATTTAGTGGACTCTGATTTAGGTAGAAAAGCTGGGGTTTCTGCTAAAAGTCAGGTGTCAAACTTGGAGAAGGATAAAGGTCAATTTGATGACAATAATGTTGCAAAGTCAAATGTTAGCCAAGCCACAACGGATAGTAGGCAGACATCAGTCAAGACTACTGATACAGAGATCCAGCAAGTAAAAGGGATTCTGCCTGAAGGATTTTTTGACAATAAGGAAGCCGATTTGCGTGCTCGTGGCATAAAGCTTGTTAAGCCAGATGTCAAAGACGAGTACAAGGAATTTGAGAAGTTGATTCAAGAAGACTTGCAGGAGGTGGATGACCGGTTGGAAGAAGAAGAGATTGATGCGGCCGAAATGATAGAAGAGGAGGAAGTTGTAGAGCAAAAGATGCTTAGCGAGAAAGTGGAAATGTTGAAGAAGAGGAGATTGGAGCTAAAAGCTGCTAATGCTGCAAAGCGTAGTAAATCATCTGAGATTGTAGCCAAGGAGTCTAGACAAGAAGAGTCATCCAGTGATGATGAAAGTGAAGAGAATTTTGCCGTGGACTGGAGAGCACAACACTTGTGA 993 0.4209 MLRNMDAQAKKKALFRAKLNAQKKEKRIESPLVRYNEFDQPVCRVCDVVLKSESLWDAHQVSRKHREAISSLKANAAGLTQHNNAKPVADASFSKAKPEHSLDSQFKPPEASQLVSKPQSSSVLPPGFFDDSGSGKTKSEHLVDSDLGRKAGVSAKSQVSNLEKDKGQFDDNNVAKSNVSQATTDSRQTSVKTTDTEIQQVKGILPEGFFDNKEADLRARGIKLVKPDVKDEYKEFEKLIQEDLQEVDDRLEEEEIDAAEMIEEEEVVEQKMLSEKVEMLKKRRLELKAANAAKRSKSSEIVAKESRQEESSSDDESEENFAVDWRAQHL* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1352 330 MobiDBLite consensus disorder prediction 292 311 - -
Gso16g1352 330 Gene3D Classic Zinc Finger 36 74 - -
Gso16g1352 330 MobiDBLite consensus disorder prediction 106 127 - -
Gso16g1352 330 MobiDBLite consensus disorder prediction 89 191 - -
Gso16g1352 330 MobiDBLite consensus disorder prediction 292 330 - -
Gso16g1352 330 SUPERFAMILY beta-beta-alpha zinc fingers 35 75 IPR036236 -
Gso16g1352 330 MobiDBLite consensus disorder prediction 172 191 - -
Gso16g1352 330 Pfam Zinc-finger of C2H2 type 43 65 - -
Gso16g1352 330 Coils Coil 237 271 - -
Gso16g1352 330 PANTHER UNCHARACTERIZED 5 330 IPR040050 GO:0003676|GO:0005681|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1352 Gso-Chr16 33031520 33037581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1352 5 330 C2H2 Transcription Factor Family AT3G02860 54.242 1.08e-97 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1352 K13104 - gmx:100808515 582.408