Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1334 ATGGAGATGAGAAGCAAGGAAGAGATAGAAATAGGAAGAGACATAACAGCAACACTGACTCCTCTCTCTTTTTGTCTCCACACTTTCTATCTTCACACTAACTGCTCTGCTTGCTTCTCTTCCCTTCCAATTCCCAATCCCAATCCCAATCCCAATCCCTATTCACTCTTCTATTGCTCCCCTCCATGCTCCGCCGCACTTTCACCTCTCCACCACTCCTCCGCCGAGCGCCACCTACCTCCCTTCGCTCACTCCTCCGACCTCTGTACCGCCCTCCGCCTCCTCCTCTCCCACCGCCCCACCTCCTCCTCCCGCCTCGCCGGCCTCCTCTCCAATCGCCACATCCTCACCTCCCTCTCTGTCCACGACGACGTTTCGGAGAGAATCAGCGTCGGTGCCGGCGCCATGGCAGAAGCGATCGCGAAGCAGCGCGGCATCCCCAACGACGACGCCGTTTTGGAGGAAGCCACGATTGCGCTCAGCGCGGTGCTAACGAACGCCGTGGAGGTGCACGATAACGAAGGGCGCGCCCTCGGAATCGCGGTTTTCGACCACATCTTCTCTTGGATCAACCACAGTTGTTCCCCCAACGCCTGCTACCGCTTTGTCCTCTCTTCTTCGCATTCAGAGGAAGCCAAACTTGGAATTGCTCCACACCTACAAATGAATGGTAGCAGGGTTAGTATTAGCAGTAGTGAATTTGCAAAAGGGGGCCTGGGTTATGGTCCAAGATTGGTTGTGAGGAGTATCAAGAAAATCAATAAGGGAGAAGAGGTCACTGTAGCCTATACGGATCTCTTGCAGACTAAGGCAATGAGACAGTCAGAGCTATGGTCAAAGTATAGGTTCGTTTGTTGTTGCAAACGATGTAGTGCTCTGCCCTCTTCCTACGTGGATCATGCGTTGCAAGAAATTTCTGCTATCACTTGTGAATCATCTGGTTCATGTTCCAAGTTCCTCAAAGACATGGCTGATAGAAGATTGACTGAGTTCATTGATGATGTTATATTGGAGTATCTTTCTGTTGGTGATCCTGAGTCTTGTTGTGAGAAGCTTGAGGAGATACTCACACAAGGTCTAAAAGAGCACTTAGAAGTCATTGAAGTAAAACCAGATTGTATATTCATGCTGCATCCCCTACATCACCACTCTATAAAAGCATACACAACACTGGCTTCTGCATATAAAGTTTGTGCTTGTGATTTATTGTCTGTAGACTCTGAAACAGATATAAACCAATTAAAAGCTTTTGACATGAGCAGGATCAGTGCTGCGTATTCTTTGGTACTTGCAGGAGCAACTCATCATCTCTTCAATTCTGAATCCTCACTGATTGCATCTGTTGCAAATTTTTGGACAGGAGCTGGTGAATCTTTGTTATCTCTAAGCAAAAGTTCTGGATGGAGTATGTGTGTTAATTTGGGTCTTGTTATTCCAAACCTTGCTTCTGCCATGAAATTCAAATGTACAAAGTGCTCCTTAATGGATAGGTTTAGAGCTGGTATGTTAAATGGTCAAATTAAAAGTGCAGATTTTGAGAATGTATCAAATGAATTTCTTCATTGTGTCTCAGATATTACTCAGAAAGTTTGGGGTTTCCTTATCTCTGATTGCCAATTTTTGCAATCATGCAAAGATCCTATCATTTCCAGCTGGCTAATGTCTACCAAAAGTTCAAGTACAGTGGATGTTGAGGTTTGCGTTAACAAAACTAACATGTGTTACACCAATGAATCTGAAAATAGCGTCTCTATGTGTCATGAACAAACCTTAGCAGATCATGCAGTAGCATGCATTTTTCAGCTTGGCGTACACTGCTTAGCATATGGAGGATTATTGGCTAGCATTTGTTATGGCCCCCATTCACATTTGGTTTGTCATGTTCAAAATGTTCTAGAACATGAAAAGAATTTTGTATTATATTCTCATTAA 1932 0.4493 MEMRSKEEIEIGRDITATLTPLSFCLHTFYLHTNCSACFSSLPIPNPNPNPNPYSLFYCSPPCSAALSPLHHSSAERHLPPFAHSSDLCTALRLLLSHRPTSSSRLAGLLSNRHILTSLSVHDDVSERISVGAGAMAEAIAKQRGIPNDDAVLEEATIALSAVLTNAVEVHDNEGRALGIAVFDHIFSWINHSCSPNACYRFVLSSSHSEEAKLGIAPHLQMNGSRVSISSSEFAKGGLGYGPRLVVRSIKKINKGEEVTVAYTDLLQTKAMRQSELWSKYRFVCCCKRCSALPSSYVDHALQEISAITCESSGSCSKFLKDMADRRLTEFIDDVILEYLSVGDPESCCEKLEEILTQGLKEHLEVIEVKPDCIFMLHPLHHHSIKAYTTLASAYKVCACDLLSVDSETDINQLKAFDMSRISAAYSLVLAGATHHLFNSESSLIASVANFWTGAGESLLSLSKSSGWSMCVNLGLVIPNLASAMKFKCTKCSLMDRFRAGMLNGQIKSADFENVSNEFLHCVSDITQKVWGFLISDCQFLQSCKDPIISSWLMSTKSSSTVDVEVCVNKTNMCYTNESENSVSMCHEQTLADHAVACIFQLGVHCLAYGGLLASICYGPHSHLVCHVQNVLEHEKNFVLYSH* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1334 643 PANTHER PROTEIN SET DOMAIN GROUP 41 1 636 - -
Gso16g1334 643 CDD SET_SMYD 125 290 - -
Gso16g1334 643 SUPERFAMILY SET domain 148 291 IPR046341 -
Gso16g1334 643 Gene3D SET domain 5 290 IPR046341 -
Gso16g1334 643 Pfam SET domain 186 263 IPR001214 GO:0005515
Gso16g1334 643 Gene3D - 34 82 - -
Gso16g1334 643 Gene3D - 83 167 - -
Gso16g1334 643 ProSiteProfiles SET domain profile. 117 264 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1334 Gso-Chr16 32797927 32802015 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Gso16g1334 SET 3.4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1334 - - gmx:100775193 1236.86