Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1330 ATGATAATGTCCTTTCCCATTTTCTTCTTCACTCTTCTACCTTTACTATTCCACTATTCTCATTGCACCACCATTCTAGTTGATGGGTCTTCAGAGTGGAAGAACCCCACAGTTCACATTGGAGATTCCATCATTTTCAATCACAAGCAACACCACAACATCTACATTTTCAAGAACCAGAAAGCCTTTGACCTCTGCAATTTCACACAAGCAACTCTTCTCACCAACCCCAACACTGCTTCCTACATGTGGCATCCATCACGGCCTGGTTTCTTCTACTTTAGCTTCAATGATGGGTCTCTCAAAGCATGTCAAGCTTCTCAGAAGCTAGCAATTAAGGTCATCACTTCAGTAGCAGCGGCAGCCACACCACATGCTTCAGCAATGCCTCCAGCTCCATTTTCTGGTGAAGTGTCACCATCTCCTTTATATCCATGGCATTACAATAATCCTCTGCATGCAGCTTCACCTGGTCCTTCACCTTCAGCAAGTGTGACAGCTCCAATGGTGCCATATAAAAGTAGCAGCATGCCCTTTATTAGCAGTAACCCTGCAGTTCCTCTTCCCACTGATGAAGTTGACTCTGCTTCTTCTATACACCCTCTTCCCACCTCTAGTGGTCATGAACTACAGGTGATGATTGGATCTTTTGGACTTCTGATAGTTGTGCACACCATTACTTTACTGCTGCTATAA 696 0.4425 MIMSFPIFFFTLLPLLFHYSHCTTILVDGSSEWKNPTVHIGDSIIFNHKQHHNIYIFKNQKAFDLCNFTQATLLTNPNTASYMWHPSRPGFFYFSFNDGSLKACQASQKLAIKVITSVAAAATPHASAMPPAPFSGEVSPSPLYPWHYNNPLHAASPGPSPSASVTAPMVPYKSSSMPFISSNPAVPLPTDEVDSASSIHPLPTSSGHELQVMIGSFGLLIVVHTITLLLL* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1330 231 PANTHER OS04G0422700 PROTEIN 1 229 - -
Gso16g1330 231 PANTHER OS04G0422700 PROTEIN 1 229 - -
Gso16g1330 231 Gene3D - 21 117 IPR008972 -
Gso16g1330 231 SUPERFAMILY Cupredoxins 22 115 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1330 Gso-Chr16 32727457 32730088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1330 1 164 Phytocyanin Superfamily AT4G28365 22.472 1.26e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1330 - - gmx:100527618 437.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1330 16 32727457 32730088 Gso20g1352 20 43653945 43655976 PCT
Gso16g1330 16 32727457 32730088 Gso10g2002 10 47004248 47006605 PCT
Gso20g1352 20 43653945 43655976 Gso16g1330 16 32727457 32730088 PCT
Gso10g2002 10 47004248 47006605 Gso16g1330 16 32727457 32730088 PCT