LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso16g1326	ATGGCTGCTTCAACAATGGCTCTCTCTTCATCATCATTGGCTGGCCAAGCTATCAAGCTTGCCCCCTCCACCCCTCAGCTTGGTGTTGGAAGGGTTAGCATGAGGAAAACAGCCTCCAAGACTGTTTCTTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGCCCCCATCCTACCTCACTGGTGAATTCCCAGGTGACTATGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACCTTTGCCAAGAACCGTGAACTTGAAGTCATCCACTCCAGATGGGCCATGTTGGGAGCCCTGGGCTGTGTTTTCCCCGAACTCTTGGCCCGCAACGGTGTCAAGTTCGGTGAAGCCGTGTGGTTCAAGGCCGGGTCTCAGATATTCAGTGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCCTGATCCATGCACAAAGCATTCTTGCCATCTGGGCCACCCAAGTTATCTTGATGGGTGCCGTTGAGGGTTACCGTATTGCTGGTGGGCCTCTTGGTGAGGTGACTGACCCAATCTATCCAGGTGGCAGCTTTGACCCATTGGGCCTTGCTGATGACCCAGAGGCTTTTGCTGAGTTGAAGGTGAAAGAGCTCAAGAATGGTAGGTTGGCCATGTTCTCCATGTTTGGTTTCTTTGTTCAGGCAATTGTGACAGGAAAGGGACCTTTGGAAAATCTTGCTGACCACCTAGCTGACCCAGTAAACAATAATGCCTGGGCCTATGCTACAAACTTTGTCCCCGGAAAGTGA	795	0.5283	MAASTMALSSSSLAGQAIKLAPSTPQLGVGRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK*	265

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso16g1326	264	Pfam	Chlorophyll A-B binding protein	64	230	IPR022796	-
	Gso16g1326	264	Gene3D	Chlorophyll a/b binding protein domain	55	257	-	-
	Gso16g1326	264	SUPERFAMILY	Chlorophyll a-b binding protein	47	261	-	-
	Gso16g1326	264	PANTHER	CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC	1	264	-	-
	Gso16g1326	264	PANTHER	CHLOROPHYLL A/B BINDING PROTEIN	1	264	IPR001344	GO:0009765\|GO:0016020

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso16g1326	Gso-Chr16	32671823	32672830	Proximal

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso16g1326	1	264	Chloroplast and Mitochondria Gene Families	AT2G34430	87.594	1.68e-172	474

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso16g1326	K08912		-	gmx:547819	535.413

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