Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1326 ATGGCTGCTTCAACAATGGCTCTCTCTTCATCATCATTGGCTGGCCAAGCTATCAAGCTTGCCCCCTCCACCCCTCAGCTTGGTGTTGGAAGGGTTAGCATGAGGAAAACAGCCTCCAAGACTGTTTCTTCTGGAAGCCCATGGTACGGCCCAGACCGTGTCAAGTACTTGGGCCCATTCTCTGGTGAGCCCCCATCCTACCTCACTGGTGAATTCCCAGGTGACTATGGTTGGGACACTGCTGGGCTTTCTGCTGACCCAGAGACCTTTGCCAAGAACCGTGAACTTGAAGTCATCCACTCCAGATGGGCCATGTTGGGAGCCCTGGGCTGTGTTTTCCCCGAACTCTTGGCCCGCAACGGTGTCAAGTTCGGTGAAGCCGTGTGGTTCAAGGCCGGGTCTCAGATATTCAGTGAGGGTGGGCTTGACTACTTGGGCAACCCAAGCCTGATCCATGCACAAAGCATTCTTGCCATCTGGGCCACCCAAGTTATCTTGATGGGTGCCGTTGAGGGTTACCGTATTGCTGGTGGGCCTCTTGGTGAGGTGACTGACCCAATCTATCCAGGTGGCAGCTTTGACCCATTGGGCCTTGCTGATGACCCAGAGGCTTTTGCTGAGTTGAAGGTGAAAGAGCTCAAGAATGGTAGGTTGGCCATGTTCTCCATGTTTGGTTTCTTTGTTCAGGCAATTGTGACAGGAAAGGGACCTTTGGAAAATCTTGCTGACCACCTAGCTGACCCAGTAAACAATAATGCCTGGGCCTATGCTACAAACTTTGTCCCCGGAAAGTGA 795 0.5283 MAASTMALSSSSLAGQAIKLAPSTPQLGVGRVSMRKTASKTVSSGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWATQVILMGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK* 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1326 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Gso16g1326 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Gso16g1326 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Gso16g1326 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 2, CHLOROPLASTIC 1 264 - -
Gso16g1326 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1326 Gso-Chr16 32671823 32672830 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1326 1 264 Chloroplast and Mitochondria Gene Families AT2G34430 87.594 1.68e-172 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1326 K08912 - gmx:547819 535.413