Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1318 ATGAATTCTTCTACACTTTTCCTTTTGTCATTCACCCTTTCCTTGATCCTCATTTCTCCTTTGCCAACCTTAGGCACAAGCTTGTATGAATCTCTATGCGATAATGCTGGTGTGGACAAGGCTAGGTGCCTTGAAGTTCTCAAAGCCGAACCTCAAATTGTTGGGGCTAAAGATAGTGTTGAACTTTGCAAGTTGGTCCTTGAATTAGGACTAAAAAAGGGATTAGAGGCCCAAACATTCCTAAAAGAAGCGATGAAGACAAATCCTTCACCAGCCATTATGCAATGTGCAACTACCCTTTATGATGGTACGATTGGATCTTTCAAAAGTTCATTGGGTGAATTGAGTGAGGATGGTCTAACCGCAAATTATGATGCCAAAGTGGCTGGTGATGGGCCTACAACTTGTGACACAACCTTGAGTAATGCCAATATCATCAATCCTTCTATTTCAGCTTTAAACAAGGACATCTTGTTGATTAGCAAACTTGCATATCTAGCCACCGATAACCTTCCCGATAATCCATAA 528 0.4091 MNSSTLFLLSFTLSLILISPLPTLGTSLYESLCDNAGVDKARCLEVLKAEPQIVGAKDSVELCKLVLELGLKKGLEAQTFLKEAMKTNPSPAIMQCATTLYDGTIGSFKSSLGELSEDGLTANYDAKVAGDGPTTCDTTLSNANIINPSISALNKDILLISKLAYLATDNLPDNP* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1318 175 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR SUPERFAMILY PROTEIN 1 171 - -
Gso16g1318 175 PANTHER PECTINESTERASE INHIBITOR DOMAIN-CONTAINING PROTEIN-RELATED 1 171 - -
Gso16g1318 175 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 170 IPR006501 GO:0004857
Gso16g1318 175 Pfam Plant invertase/pectin methylesterase inhibitor 30 143 IPR006501 GO:0004857
Gso16g1318 175 Gene3D Invertase/pectin methylesterase inhibitor family protein 26 170 IPR035513 -
Gso16g1318 175 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 171 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1318 Gso-Chr16 32579668 32580558 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1318 - - gmx:102669481 300.441
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1318 16 32579668 32580558 Gso2g0658 2 6796841 6797647 GST
Gso16g1318 16 32579668 32580558 Gso20g1357 20 43713233 43713956 PCT
Gso16g1318 16 32579668 32580558 Gso10g1996 10 46945136 46945790 PCT
Gso10g1997 10 46949107 46949848 Gso16g1318 16 32579668 32580558 PCT