Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1316 ATGGCTAGGGTTAGTGCTTTGTTTCACTCTTTGCTCTTGATTTCTTCCCTTGTATTGGCTTCTCAAATCCATGTTTCCTCTGGGAAACTAGTCCCTGGACTATCATGGAATTACTATTTGTTGACATGTCCCAAGCTTGAGAGGATTATAAGGAAGCATCTTGAGGATGTCTTCGAGAAGGACAGTGGAGTAGCTCCTGGCATACTTCGACTCTTCTTCCATGACTGCTTTCCTAATGGATGCGATGCGTCTATATTGTTGAATGGAGACGGTGACGAGAAGCAACACCGTGCTAACTTTGGTTTAAGGCAAGAGGCCATTGACGCCATTGAAAACCTTCGGGTTCTCATTTACAAGCAGTGTCTACCAGTTGTCTCATGCTCAGACATCCTTGTTATCGCAGCACGTGAAGCTGTTCGCCAATTAGGAGGCCCTGATTTTGACGTGCCACTGGGAAGAAAAGACGGTCTAGGACCAAACGCCACCGCGCCGGACAACCTACCGGCACCATTCTTCCGAACCGACGATCTTCTCAGAGGATTCGGAAATAGAGGTTTCGATGCCACCGATGTGGTCGCTCTCTCCGGCGCACACACCTACGGTCGTGCCCACTGTCCCTCCCTAGTGAACAGAACCATCGAAACGGACCCACCAATCGACCCAAACTTCAACAACAATTTGATAGCTACGTGTCCCAATGCCGAGTCCCCCAACACCGTTAATTTGGACGTGAGAACCCCCGTGAAGTTCGACAACATGTATTACATCAACCTCTTGAACCGCCAAGGAGTGTTCACTTCTGACCAGGACATCGCGGGCAGCCCCAAAACCAAGGAAATCGTGAACCAGTTCGCTTCAGACCAGAAACTGTTTTTTAAGAAATTTTCCGATGCTTTTGTGAAGGTGAGCCAGCTAGATGTGATAACGGATCGTATTGGGAAAGGGGAGATTCGTGATAAGTGCTTTGTTGCAAATAAGAGAAGATCTTCTATGGCGTCTGTGGTGGAAGAAGTAGTGGAATTGGCTCAGGAGATATAA 1038 0.4798 MARVSALFHSLLLISSLVLASQIHVSSGKLVPGLSWNYYLLTCPKLERIIRKHLEDVFEKDSGVAPGILRLFFHDCFPNGCDASILLNGDGDEKQHRANFGLRQEAIDAIENLRVLIYKQCLPVVSCSDILVIAAREAVRQLGGPDFDVPLGRKDGLGPNATAPDNLPAPFFRTDDLLRGFGNRGFDATDVVALSGAHTYGRAHCPSLVNRTIETDPPIDPNFNNNLIATCPNAESPNTVNLDVRTPVKFDNMYYINLLNRQGVFTSDQDIAGSPKTKEIVNQFASDQKLFFKKFSDAFVKVSQLDVITDRIGKGEIRDKCFVANKRRSSMASVVEEVVELAQEI* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1316 345 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Gso16g1316 345 PANTHER PEROXIDASE 25-RELATED 15 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 CDD secretory_peroxidase 33 323 IPR033905 GO:0004601|GO:0042744
Gso16g1316 345 PRINTS Plant peroxidase signature 43 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 PRINTS Plant peroxidase signature 67 87 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 PANTHER PEROXIDASE FAMILY PROTEIN 15 329 - -
Gso16g1316 345 SUPERFAMILY Heme-dependent peroxidases 33 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 Gene3D Peroxidase, domain 2 169 303 - -
Gso16g1316 345 Pfam Peroxidase 51 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 ProSiteProfiles Plant heme peroxidase family profile. 33 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 ProSitePatterns Peroxidases active site signature. 65 76 IPR019794 GO:0004601
Gso16g1316 345 PRINTS Haem peroxidase superfamily signature 65 79 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1316 345 Gene3D - 37 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1316 Gso-Chr16 32546566 32549348 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1316 30 342 Peroxidase AT1G71695 49.843 3.71e-103 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1316 K00430 - gmx:100795412 664.07