Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1314 ATGGCTAGGTCTAGTGCTTATCCTTTGTTCTTGATTTCTTCCATTCTGTTTATTTCACACATTTATGCCTCCCAAGTAGAAGCCAAGCCCCCAGTAGTGAAGGGACTATCATATTCTTTCTATTCCAAAACATGCCCCAAGCTTGAGTCCATTGTGAGGAAACATCTCAAGAAGGTGTTCAAGGATGACAATGGCCAAGCTCCTGCCTTACTCCGCATTTTCTTCCATGATTGTTTTGTTCAGGGATGTGATGGATCATTGCTGCTAGATGGGAGTCCAAGTGAAAGAGACCAACCAGCCAACGGAGGCATCAGAACTGAGGCCTTGCAAACCATTGATGACATCAGAGGTATTATCCATAAGGAGTGTGGAAGGATCGTTTCTTGCGCAGATATCACTGTTTTGGCAGCACGTGATTCAGTTTTCCTGACAGGAGGTCCCGATTATGCAGTGCCACTAGGAAGACGAGATGGCCTGAGCTTCAGCACATCAGGAACAAGTGATCTCCCCAAACCCTTCAACACCACCGGCGTGACCCTTGACGCTTTCGCCGCCAAAAACTTTGATGTCACCGACGTTGTCGCCTTATCCGGCGCACACACCTTTGGTCGTGCCCATTGCGGCACATTCTTCAACAGGCTCTCCCCTCTCGACCCCAACATGGACAAAACCCTAGCCAAGCAACTACAATCCACTTGCCCCGACGCAAACTCCGGCAACACCGCCAACTTGGACATCAGAACCCCGACTGTGTTCGACAACAAATACTACCTTGACCTAATGAACCGCCAAGGGGTGTTCACCTCTGACCAGGACTTGCTCAATGATAAGAGGACTAAGGGGTTGGTCAATGCATTTGCGTTGAACCAAACGTTGTTCTTTGAGAAGTTTGTGGATGCTACTATAAAGTTGAGTCAATTGGATGTGCTCACTGGAAATCAAGGTGAAATTCGTGGCAAGTGCAATGTGGTGAATGCTAGGAAGTCTTTGTTGACGTCTGTGGTGGAAGAGGTGGTGCAATTGGTTGATCAGTTTTGA 1038 0.4788 MARSSAYPLFLISSILFISHIYASQVEAKPPVVKGLSYSFYSKTCPKLESIVRKHLKKVFKDDNGQAPALLRIFFHDCFVQGCDGSLLLDGSPSERDQPANGGIRTEALQTIDDIRGIIHKECGRIVSCADITVLAARDSVFLTGGPDYAVPLGRRDGLSFSTSGTSDLPKPFNTTGVTLDAFAAKNFDVTDVVALSGAHTFGRAHCGTFFNRLSPLDPNMDKTLAKQLQSTCPDANSGNTANLDIRTPTVFDNKYYLDLMNRQGVFTSDQDLLNDKRTKGLVNAFALNQTLFFEKFVDATIKLSQLDVLTGNQGEIRGKCNVVNARKSLLTSVVEEVVQLVDQF* 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1314 345 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Gso16g1314 345 Gene3D - 40 321 - -
Gso16g1314 345 PANTHER PEROXIDASE 12 329 - -
Gso16g1314 345 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Gso16g1314 345 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 PRINTS Plant peroxidase signature 107 120 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 PRINTS Plant peroxidase signature 126 136 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 PRINTS Plant peroxidase signature 145 160 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 SUPERFAMILY Heme-dependent peroxidases 35 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 PANTHER PEROXIDASE 25-RELATED 12 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 CDD secretory_peroxidase 35 324 IPR033905 GO:0004601|GO:0042744
Gso16g1314 345 Pfam Peroxidase 52 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 PRINTS Haem peroxidase superfamily signature 127 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 PRINTS Haem peroxidase superfamily signature 145 157 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso16g1314 345 Gene3D Peroxidase, domain 2 171 305 - -
Gso16g1314 345 ProSiteProfiles Plant heme peroxidase family profile. 35 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1314 Gso-Chr16 32533563 32536484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1314 9 342 Peroxidase AT1G71695 53.026 4.68e-127 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1314 K00430 - gmx:547550 681.019