Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1284 ATGGATTTCGGTGAGGGTTATGTATCAAATGAGCATCGCGAGCTTCATCAATCTGCAACAGAAAGTGCAGATCCATTATCTGTTTCTCCATTGCAGCTTTCACCTAAGTCATCACGATCACCAAATTCTCCAAGGTCCCCTAAATCTCCTAGGACTCCACAATCTCCAAGGTCCCCAACGGGGCAAGGCAAGTGCAGCAATCTAAGTCCAAGGAATCATAGACAATCATATTTTCAAAAAGATGGACGTCCAAAGAAAGGTGGTTCTGGGGGAAAAGGTACCTGGGGTGGATTGCTTGATACAGATGACACGAATGTTCTTGATCCTAATGATCCAAACTATGACAGCAGTGAGGAATTTGACCATTCAAATGAAAAGAAACCGACAACAGATCTTGAAAACTACAAGAAAAAAGCTACAATAATAGTGGAGGAATACTTTTCCACTGATGGTGTTATTGCAACAATGAATGAAGTTAAAGAATTGGGAAAACCACAGTATGGCTACTATTTTGTCAAAAAACTTGTCTCTATGTCCATGGACAGACATGACAAAGAAAAAGAAATGGCTGCTATTCTGTTATCTGCACTTTATTCTGACGTAGTTGATCCTTCACAAGTTTACAAAGGCTTCAGCAAATTAGTTGAATCAGCAGATGACTTGATTGTAGATATACCAGACACAGTTGAAATTCTAGCTCTTTTCATAGCTCGAGCAGTGGTTGATGACATACTTCCTCCTGCATTTTTGAAGAAACAGATGGCCTACTTACCCAAAGATTCAAAAGGGGTTGAGGTCTTGAAAAAAACTGAGAAAAGCTATCTAGCAGCCCCTCTGCATGCAGAAATCATAGAGCGGTGCTGGGGTCGAAGTAAGAATACCACAGTTGATGATGTTAAAGTTAAGATAAACAATTTTTTGAAGGAATATGTTGCAAGTGGTGACAAGAAAGAAGCCTCTAGATGCATCAAAGATTTGAAAGTTCCTTTTTTCCATCACGAAATAGTGAAACGGGTTCTTATAATGGCAATGGAGAGACGTCAAGCTGAATCCCCACTGTTAGACCTGTTGAAGGCAGCAGCTGAAGAAGGTTTCATTAACTCCAGCCAAATGTCTAAAGGGTTCAGTCGGTTGATTGACACAGTTGATGACTTATCACTTGACATACCAAATGCACGTGGAATACTGCAACAACTAATGTCTAAAGCAGCATCTGAGGGTTGGTTATGTGTGTCATCTTTGAAATCACTTTCAGAGGAGCCTGAAAAAAACACAATAGAAGATGGTGCTGCCAAAAGTTTCAAGGTAAAGACTCAGTCCATCATTCAAGAGTACTTCTTATCAGGCGATATATTGGAGGTAAATAGCTGTCTAGAACAAGCAAACAGCAATAACTGTGCTGCACTCAATGCAATCTTTGTTAAAAAGCTGATAACTCTGGCAATGGATAGGAAGAATAGAGAGAAGGAAATGGCTTCTGTGTTGCTGTCGTCTTTGTGTTTCCCAGCTGATGATGTTGTGAGTGGTTTTGTGATGTTAATAGAGTCAGCAGATGATACTGCTCTGGACAATCCTGTTGTTGTTGAGGATCTTGCTATGTTTTTAGCTAGAGCAGTGGTGGATGAAGTCCTGGCCCCACAACACCTTGAAGAGATAGGAACACAGTGTTTAGGGCCAGGTTCAGTTGGGAGCAAAGTGCTTCGAATGACAAAGTCATTGCTAAAGGCTAGGCTTGCTGGGGAGCGAATCTTGAGGTGTTGGGGTGGTGGAGGGAGTAGCAGGTCAGGATGGGCATTTGAGGATGTCAAGGACATGATTGGGAAGCTGTTGGAGGAGTATGAGTCTGGAGGCGAGATAAGGGAGGCGTGTCGCTGCATGAAAGAGTTAGGAATGCCATTTTTCCATCATGAGGTTGTTAAGAAAGCTTTGGTGACAACCATTGAAAAGAAGAATGAGAGATTATGGGGTCTACTCAAGGAGTGCTTTGAATCAGGACTAATAACCATGAATCAAATGGTGAAGGGCTTTGGAAGGGTTGCAGAATCTCTTGATGACTTGGCCTTGGATGTCCCTGATGCTAAAATTCAGTTTGCAAACTATGTTGAAAGAGCAAAGGCCAATGGATGGTTGGACAATTCATTTTGTTTCAGCAAACAGGAACATGCAACAGAGAATGGCACTCACTAA 2187 0.4175 MDFGEGYVSNEHRELHQSATESADPLSVSPLQLSPKSSRSPNSPRSPKSPRTPQSPRSPTGQGKCSNLSPRNHRQSYFQKDGRPKKGGSGGKGTWGGLLDTDDTNVLDPNDPNYDSSEEFDHSNEKKPTTDLENYKKKATIIVEEYFSTDGVIATMNEVKELGKPQYGYYFVKKLVSMSMDRHDKEKEMAAILLSALYSDVVDPSQVYKGFSKLVESADDLIVDIPDTVEILALFIARAVVDDILPPAFLKKQMAYLPKDSKGVEVLKKTEKSYLAAPLHAEIIERCWGRSKNTTVDDVKVKINNFLKEYVASGDKKEASRCIKDLKVPFFHHEIVKRVLIMAMERRQAESPLLDLLKAAAEEGFINSSQMSKGFSRLIDTVDDLSLDIPNARGILQQLMSKAASEGWLCVSSLKSLSEEPEKNTIEDGAAKSFKVKTQSIIQEYFLSGDILEVNSCLEQANSNNCAALNAIFVKKLITLAMDRKNREKEMASVLLSSLCFPADDVVSGFVMLIESADDTALDNPVVVEDLAMFLARAVVDEVLAPQHLEEIGTQCLGPGSVGSKVLRMTKSLLKARLAGERILRCWGGGGSSRSGWAFEDVKDMIGKLLEEYESGGEIREACRCMKELGMPFFHHEVVKKALVTTIEKKNERLWGLLKECFESGLITMNQMVKGFGRVAESLDDLALDVPDAKIQFANYVERAKANGWLDNSFCFSKQEHATENGTH* 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1284 728 MobiDBLite consensus disorder prediction 1 131 - -
Gso16g1284 728 Gene3D - 284 417 - -
Gso16g1284 728 Gene3D - 585 717 - -
Gso16g1284 728 SUPERFAMILY ARM repeat 598 716 IPR016024 -
Gso16g1284 728 SUPERFAMILY ARM repeat 295 417 IPR016024 -
Gso16g1284 728 SUPERFAMILY ARM repeat 432 592 IPR016024 -
Gso16g1284 728 MobiDBLite consensus disorder prediction 55 75 - -
Gso16g1284 728 ProSiteProfiles MI domain profile. 433 554 IPR003891 -
Gso16g1284 728 Gene3D - 423 577 - -
Gso16g1284 728 Gene3D - 122 273 - -
Gso16g1284 728 Pfam MA3 domain 136 246 IPR003891 -
Gso16g1284 728 Pfam MA3 domain 300 409 IPR003891 -
Gso16g1284 728 Pfam MA3 domain 435 544 IPR003891 -
Gso16g1284 728 Pfam MA3 domain 603 711 IPR003891 -
Gso16g1284 728 MobiDBLite consensus disorder prediction 115 131 - -
Gso16g1284 728 MobiDBLite consensus disorder prediction 1 19 - -
Gso16g1284 728 PANTHER MA3 DOMAIN-CONTAINING PROTEIN 1 721 - -
Gso16g1284 728 SUPERFAMILY ARM repeat 128 292 IPR016024 -
Gso16g1284 728 ProSiteProfiles MI domain profile. 134 255 IPR003891 -
Gso16g1284 728 SMART ma3_7 299 410 IPR003891 -
Gso16g1284 728 SMART ma3_7 602 711 IPR003891 -
Gso16g1284 728 SMART ma3_7 434 545 IPR003891 -
Gso16g1284 728 SMART ma3_7 135 246 IPR003891 -
Gso16g1284 728 ProSiteProfiles MI domain profile. 601 720 IPR003891 -
Gso16g1284 728 ProSiteProfiles MI domain profile. 298 419 IPR003891 -
Gso16g1284 728 PANTHER PROGRAMMED CELL DEATH 4 1 721 IPR039778 GO:0045892
Gso16g1284 728 MobiDBLite consensus disorder prediction 20 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1284 Gso-Chr16 32206840 32210085 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1284 379 584 Eukaryotic Initiation Factors Gene Family AT3G60240 25.339 2.90e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1284 - - gmx:100806217 1350.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1284 16 32206840 32210085 Gso2g0636 2 6599968 6604800 GST