Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1277 ATCCTTAAAAACACACTCCTTTTGTTCACTCCCCGCAAGTTTCTTTCCGTGAAATCCCTATTGAGAGCGCAACAACAACACACACCATCAACAAGGACGAAGACTTGCTTCAAGTTGGTAGGAGAATTGCCATTTGTGGACAAAGAGGATACCCAAAATCTACACAAAACAATAAAGACAGTTATGGCTGTTCAATACAAGTTCCCTGACAAAGTTTGCATATCATCTGAAGACAGTAAAAATCTGATATCCCGCATTTTTGTGGCAAATCCAGCAATGAGAATCACCCTAAAGGAAATCAAGTCACATCCATGGTTTTTAAAGAACTTGCCTAAGGAATTGAGAGAAGGGGCTCAAGATGTTTAG 366 0.3989 ILKNTLLLFTPRKFLSVKSLLRAQQQHTPSTRTKTCFKLVGELPFVDKEDTQNLHKTIKTVMAVQYKFPDKVCISSEDSKNLISRIFVANPAMRITLKEIKSHPWFLKNLPKELREGAQDV* 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1277 121 PANTHER SUCROSE NON-FERMENTING-LIKE KINASE 2 FAMILY PROTEIN 3 114 - -
Gso16g1277 121 Gene3D Transferase(Phosphotransferase) domain 1 35 120 - -
Gso16g1277 121 PANTHER SERINE/THREONINE KINASE 3 114 - -
Gso16g1277 121 SUPERFAMILY Protein kinase-like (PK-like) 39 111 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1277 Gso-Chr16 32123661 32124926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1277 39 110 CBL-interacting serine-threonine protein kinases AT2G25090 37.500 3.75e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1277 K14498 - gsj:114389968 243.432