Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1274 ATGGTATTCTCTGCAAAATATGGGAGAAGTGATGGAAATAGTTGGGCAAGCATCAAAGGCTTTTCCCTCCAAGTCCTCACAGGGAGGTGGTTCATGATGTTTTCATCATTTATGATCATGTCAGTGTCAGGAGCAACCTACATGTTTAGCCTCTACTCCCGGGAAATCAAGTTGGTTCTTGGTTATGACCAATCCACTCTTAATCAGTTAAGTTTCTTTAAGGACTTGGGTGCCAACATAGGCATTCTTTCAGGCCTAATCAACGAGGTCACACCCCCTTGGGCTAGCTTATTAATTGGTGGAGTTCTCAACTTTTTTGGGTACTTTGCAATTTGGCTTGCTGTCACCGGCAAAATTGCAAAGCCCCAAGTGTGGAACATGTGCTTGTACATCTTCATTGGAGCAAATTCCCATTGCTCAACCAAAACTGGAGCTGTTGTGACCAGTGTCAAGAACTTCCCTGGCATCAGAGGCATTGTCTTAGGCCTTTTGAGTGGGTATCAGGGTGTAAGTGCAGCAATAATTACTCAGCTATACTATGCCTTCTATGGAAATGACTCCAAATCCCTCATTTTGCTCATGGCATGGCTACCAACTGCTACAGCTATTGTGTTCCTTCCAGTTATCAGAAACCACAGGAGTATTCAACAGCCAAATGACACTAAAGCTTTCTATAGGTTCCTCTATTTATCATTAGTCCTAGCGGGGTTCCTAATGATCGTAATTATAGCACAACAATGTTTCACTTTCTCTCCAAATGAATATAATGTTACTACCACTGTGATGCTTCTTTTGCTCATCCTTCCACTGGCTGTTGTTATTGTAGAAGAACACAAGATTTGGAAGAGTAGACAACAAAACATCAATAGGGAAGATAGTCAAATGTTGTTGGCAAACTATCCCAATATAGCTACAGAAAATCCTTATCAAGAGGAGTCTTCCCATACAGAACAAACTGTCGAAGAAAAAGTATCCTGTTGGGAAAACATACTCAGGCCCCCAGAAAGGGGTGAAGATCATACAATACTTCAAGCCATTTTTAGCCTTGACATGCTGGTTCTCTTATTAGTTTCTATATGTTCATTTGGTAGCAATCTGACTATGGTAAATAACTTAAGTCAAATTGGAATTTCATTAGGATATCCAGCACATACCATAACCACATTTGTCTCCCTTATGTCCCTTTGGATCTATTTAGGTAAGGTCGTTCAAGGGGTTGTCGCAGAATTTATCTTATCCAAATTTAAAGTCCCTAGACCTTTCATGCTCACATCGTTACTTCTATTATCTTGTGTTGGTCATCTTTTAATTGCATTCAATGTCCCAAATGGTCTCTATATAGCCTCAATTGTTATTGGCTTCTGCTTTGGGGCTAACTGGCCTTTACTCTATTCCATCATATCTGAACTTTTTGGCCTTAAACATTATTCAACATTGTTCAATGTTGGGTCAATATCAAGTCCAATTGGGTCATACTTGCTCAGTGTGAGGGTTGCAGGGTATTTATATGATATGGAAGCAAGAAGGCAAATGGAAGCTTTGGGGCAAAAGACAAGTCCAGGGGAGGAGCTGAACTGCAATGGTGATGAGTGCTACAAGTTGGCATTCATTACAATGACTGCAGTTTGCTTGTTTGGGGCATGTTTGTCACTCATTCTGGTCTTTAGGACCATACAACTTTATAGAAGAGACCTATACAAGAAATTCAATGGTGCTACAACTGATGTAACTGAAACAACTGATGTAACTGAAACGGCTGTGTCTTAG 1767 0.4046 MVFSAKYGRSDGNSWASIKGFSLQVLTGRWFMMFSSFMIMSVSGATYMFSLYSREIKLVLGYDQSTLNQLSFFKDLGANIGILSGLINEVTPPWASLLIGGVLNFFGYFAIWLAVTGKIAKPQVWNMCLYIFIGANSHCSTKTGAVVTSVKNFPGIRGIVLGLLSGYQGVSAAIITQLYYAFYGNDSKSLILLMAWLPTATAIVFLPVIRNHRSIQQPNDTKAFYRFLYLSLVLAGFLMIVIIAQQCFTFSPNEYNVTTTVMLLLLILPLAVVIVEEHKIWKSRQQNINREDSQMLLANYPNIATENPYQEESSHTEQTVEEKVSCWENILRPPERGEDHTILQAIFSLDMLVLLLVSICSFGSNLTMVNNLSQIGISLGYPAHTITTFVSLMSLWIYLGKVVQGVVAEFILSKFKVPRPFMLTSLLLLSCVGHLLIAFNVPNGLYIASIVIGFCFGANWPLLYSIISELFGLKHYSTLFNVGSISSPIGSYLLSVRVAGYLYDMEARRQMEALGQKTSPGEELNCNGDECYKLAFITMTAVCLFGACLSLILVFRTIQLYRRDLYKKFNGATTDVTETTDVTETAVS* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1274 588 Gene3D MFS general substrate transporter like domains 346 560 IPR036259 -
Gso16g1274 588 SUPERFAMILY MFS general substrate transporter 228 558 IPR036259 -
Gso16g1274 588 CDD MFS_Mch1p_like 28 547 - -
Gso16g1274 588 Pfam Major Facilitator Superfamily 354 555 IPR011701 GO:0022857|GO:0055085
Gso16g1274 588 SUPERFAMILY MFS general substrate transporter 11 214 IPR036259 -
Gso16g1274 588 PANTHER MFS TRANSPORTER 4 587 - -
Gso16g1274 588 Pfam Nodulin-like 29 274 IPR010658 -
Gso16g1274 588 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 4 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1274 Gso-Chr16 32103986 32107699 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1274 16 570 Nodulin-like Gene Family AT2G39210 57.885 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1274 - - gmx:102661181 1110.9