Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1268 ATGTTCCTCAAAACCCAATTCCTGTTCCTCCTCACCCTTGTTTTAGCAACAAGCACAGTTACCACCGCCATAGACCCAGGTTCTACCCTCTCAGCTTCTTCTTCCAACCAAACGTGGTCTTCTCCCAGCGGCACCTTCTCCCTCCTATTCATCCCCGTCCAGCCACCAACCACCCCTCCCTCCTTCATCGCTGCCATCGCCTACACCGGCGGCAACCCCGTCGTCTGGTCCGCTGGAAACGGCGCCGCCGTGGACTCCGGCGGGTCCCTCCAGTTCCTCCGCTCCGGCGACCTCCGCCTCGTCAACGGCTCCGGCTCCGCCGTGTGGGACGCCGGCACGGCGGGTGCCACTTCAGCAACCCTCGAAGACAGTGGCAATTTGGTAATTTCCAACGGCACTGGCACCCTCTGGTCAAGCTTTGACCACCCCACTGATACCCTTGTGCCCTCTCAGAATTTTAGTGTTGGTAAGGTTCTCACTTCTGAAAGGTACTCTTTTAGCCTTAGTTCAATTGGGAATTTGACCCTAACATGGAACAATAGCATAGTGTACTGGAACCAGGGGAACTCTTCTGTGAATGCGAGTTCGGATTCCCCTGTGTTGGCCTTGTCTCCAATTGGGCTTTTGCAACTTTCTTATGCGAAATTGAGCACTGTTGCTCTTGTTGCCTATAGTAGTGACTATGATAAGAATGATGGAGTGTTTAGGGTGTTGAAGTTGGATAATGATGGCAATTTGAGGATTTATAGCAGTAGTCTTGGTGGTGGAACTCCTAGTGTTAGATGGACTGCTGTTTCGGATCAATGTGAGGTTTATGCCTACTGTGGGAACTATGGTGTGTGTAGTTACAACGATTCAAGCCCGGTTTGCGGTTGCCCGTCTCAGAATTTTGAGATGGTTGATCCAAATGATAGTAGGAGAGGGTGCAGGAGGAAGGTGAGTCTTGATAGTTGTCAAAGGAATGTGACTGTGTTGACGTTGGATCATACTGTGGTCTTGAGTTATCCCCCTGAGGCAGCGTCGCAGTCGTTTTTCATTGGTTTATCAGCATGTAGTACGAATTGTCTTTCGAATTCGGGTGCCTGTTTTGCTGCTACTTCCTTGTCAGATGGCTCGGGGCAGTGTGTAATAAAATCAGAAGATTTTGTTAGTGGATATCATGATCCTTCGCTGCCTAGCACTTCATATATCAAGGTTTGTCCGCCGCTAGCGCCAAATCCGCCACCCTCTATAGGGGACTCTGTGAGGGAAAAGAGGTCCAGGGTGCCTGCTTGGGTTGTGGTGGTGATCATTTTGGGTACCCTTTTGGGTTTGATTGCCTTGGAAGGTGGTTTGTGGATGTGGTGTTGTAGGCACAGCACAAGGCTTGGTGTGTTGTCTGCTCAGTACGCACTTCTTGAGTATGCTTCTGGTGCACCCGTGCAGTTCTCGTACAAGGAGCTCCAGCAAGCGACAAAGGGGTTCAAGGAGAAGCTTGGAGCTGGTGGATTTGGCGCTGTGTATAGAGGAACTCTTGTTAACAAAACAGTTGTTGCTGTGAAGCAACTTGAGGGCATTGAGCAAGGTGAGAAGCAGTTTAGGATGGAAGTTGCCACCATAAGTAGCACACATCATCTGAATTTGGTGAGGCTTATTGGCTTTTGCTCAGAAGGGCGCCACCGGCTTCTGGTTTATGAGTTCATGAAAAATGGGTCTCTTGATGATTTTCTATTCCTGACAGAACAGCATTCCGGAAAATTATTGAATTGGGAGTATCGATTCAACATTGCCCTGGGCACTGCAAGAGGCATCACATACCTACATGAGGAGTGCCGTGACTGCATAGTCCATTGTGACATAAAACCTGAAAACATACTCCTGGATGAGAATTATGTTGCTAAAGTCTCAGATTTTGGTCTTGCAAAGCTCATTAATCCTAAGGACCACCGGCATCGGACCTTGACAAGTGTGAGAGGAACCCGAGGATATTTAGCTCCCGAGTGGCTTGCAAATCTTCCCATAACTTCCAAATCTGATGTTTATGGCTATGGCATGGTTTTGTTGGAGATTGTGAGTGGGAGGAGGAATTTTGATGTGTCAGAGGAAACAAATAGGAAGAAGTTCTCCATTTGGGCTTATGAAGAGTTTGAGAAAGGTAACATAAGTGGAATTTTGGACAAAAGGCTAGCTAACCAAGAAGTTGATATGGAGCAAGTAAGAAGAGCAATTCAGGCAAGCTTTTGGTGCATCCAAGAGCAGCCATCTCACAGACCAACAATGAGCAGAGTGCTACAAATGCTTGAAGGGGTAACAGAGCCTGAAAGGCCACCTGCCCCAAAATCAGTGATGGAAGGAGCTGTTAGTGGAACCAGCACATACCTGAGTAGCAATGCCAGTGCATTCTCAGTCGGAGTTTCACCCCCTGGTCCCTCTTCTTCATCATCATTTCAGACTAGTGCTGTTTCAACCTTCACCTCAGGAAGGAACCTTGAGAAGACAACCTCATCCCTTTTACAATCAGACACATGA 2508 0.4833 MFLKTQFLFLLTLVLATSTVTTAIDPGSTLSASSSNQTWSSPSGTFSLLFIPVQPPTTPPSFIAAIAYTGGNPVVWSAGNGAAVDSGGSLQFLRSGDLRLVNGSGSAVWDAGTAGATSATLEDSGNLVISNGTGTLWSSFDHPTDTLVPSQNFSVGKVLTSERYSFSLSSIGNLTLTWNNSIVYWNQGNSSVNASSDSPVLALSPIGLLQLSYAKLSTVALVAYSSDYDKNDGVFRVLKLDNDGNLRIYSSSLGGGTPSVRWTAVSDQCEVYAYCGNYGVCSYNDSSPVCGCPSQNFEMVDPNDSRRGCRRKVSLDSCQRNVTVLTLDHTVVLSYPPEAASQSFFIGLSACSTNCLSNSGACFAATSLSDGSGQCVIKSEDFVSGYHDPSLPSTSYIKVCPPLAPNPPPSIGDSVREKRSRVPAWVVVVIILGTLLGLIALEGGLWMWCCRHSTRLGVLSAQYALLEYASGAPVQFSYKELQQATKGFKEKLGAGGFGAVYRGTLVNKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNGSLDDFLFLTEQHSGKLLNWEYRFNIALGTARGITYLHEECRDCIVHCDIKPENILLDENYVAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDVYGYGMVLLEIVSGRRNFDVSEETNRKKFSIWAYEEFEKGNISGILDKRLANQEVDMEQVRRAIQASFWCIQEQPSHRPTMSRVLQMLEGVTEPERPPAPKSVMEGAVSGTSTYLSSNASAFSVGVSPPGPSSSSSFQTSAVSTFTSGRNLEKTTSSLLQSDT* 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1268 835 Pfam D-mannose binding lectin 74 164 IPR001480 -
Gso16g1268 835 ProSiteProfiles Bulb-type lectin domain profile. 21 142 IPR001480 -
Gso16g1268 835 CDD STKc_IRAK 492 762 - -
Gso16g1268 835 Pfam Protein kinase domain 489 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1268 835 PANTHER OS07G0415500 PROTEIN 5 825 - -
Gso16g1268 835 MobiDBLite consensus disorder prediction 792 835 - -
Gso16g1268 835 ProSiteProfiles PAN/Apple domain profile. 318 400 IPR003609 -
Gso16g1268 835 SMART serkin_6 486 760 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1268 835 PIRSF SRK 1 818 IPR024171 GO:0004674
Gso16g1268 835 Pfam S-locus glycoprotein domain 230 293 IPR000858 GO:0048544
Gso16g1268 835 ProSitePatterns Serine/Threonine protein kinases active-site signature. 608 620 IPR008271 GO:0004672|GO:0006468
Gso16g1268 835 ProSiteProfiles Bulb-type lectin domain profile. 144 261 IPR001480 -
Gso16g1268 835 ProSitePatterns Protein kinases ATP-binding region signature. 492 514 IPR017441 GO:0005524
Gso16g1268 835 PANTHER G-TYPE LECTIN S-RECEPTOR SERINE/THREONINE-PROTEIN KINASE 5 825 - -
Gso16g1268 835 Gene3D Transferase(Phosphotransferase) domain 1 561 774 - -
Gso16g1268 835 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 189 IPR036426 -
Gso16g1268 835 SUPERFAMILY Protein kinase-like (PK-like) 469 761 IPR011009 -
Gso16g1268 835 Gene3D Phosphorylase Kinase; domain 1 456 560 - -
Gso16g1268 835 Gene3D - 17 140 IPR036426 -
Gso16g1268 835 Gene3D - 141 264 IPR036426 -
Gso16g1268 835 ProSiteProfiles Protein kinase domain profile. 486 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1268 835 SMART blect_4 30 143 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1268 Gso-Chr16 32068564 32071756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1268 459 770 Receptor kinase-like Gene Family AT5G20050 44.308 4.35e-79 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso16g1268 Pkinase 1.7e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1268 - - gmx:100795819 1392.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1268 16 32068564 32071756 Gso2g0625 2 6523984 6527004 GST