Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1266 ATGGAGGCACCATCTCCCACCAAACCCAACGACCCAACAAAACCTTCCAACACTTCCACCACCCTTAGTCTGGAGGCCGGCCCGGCCCAAGCGAGCCCACTCCGAAAAATGTTTGCCGTGGCGTCCATCGCCGCCGGCATACAGTTCGGGTGGGCTCTCCAGCTCTCTCTTCTAACCCCCTACGTTCAGCTTTTAGGAGTCCCCCACGCGGCGGCCTCCTTCATCTGGCTCTGCGGGCCCATCTCCGGGCTCGTGGTACAGCCCATTGTGGGCTACTACAGCGACCACTGTACCTCCCGCTTTGGTCGCAGGCGCCCCTTTATTCTCGGGGGCGCCTTAGCCGTCGCCGTCGCCGTGTTCCTCATTGGTTACGCAGCCGATATAGGATACGCGGCGGGTGACGACATATCGAAAACGACCCGACCCCGAGCGGTCGGGGTCTTCGTCATAGGATTTTGGATCCTAGACGTGGCCAACAACATGCTTCAAGGACCCTGTCGCGCCTTTCTAGCAGACCTAGCTGCCGGCGACCAACGAAAAACAAGAATTGCTAACGGTTTTTTCTCGTTTTTCATGGCCGTGGGCAACGTGCTAGGTTACGCAGCAGGGTCCTACAAAGGTCTCCACAAGATGTTTCCCTTCACGGAGACCAAGGCCTGCGACGTGTTCTGCGCAAATCTCAAGAGCTGCTTCTTTTTCTCAATCCTCTTGCTGCTGTTTTTAGCAACGGTTGCTCTGCTCTACGTAAAGGACAAGCAAGTGGAAGCACGGGCCTTGGATGACGCCACGCAACCCTCGTGCTTCTTTCAGCTTTTCGGTGCTCTGAAAGAGCTCAAGAGACCGATGTGGATGCTGATGCTGGTGACAGCTGTGAACTGGGTGGGGTGGTTCCCTTACTTTTTGTTCGACACCGATTGGATGGGGCGCGAGGTGTACGGTGGTCAAGTGGGGGAGGACGCGTACGCCAATGGAGTGCGCGTTGGGTCGCTAGGGCTGATGGTAAACGCCGTCGTTTTGGGCTTCATGTCGCTGGCGGTGGAGCCGTTGGGGAAGATGGTTGGGGGAGTGAAGAGGCTGTGGGCGATTGTGAACTTTATTCTGGCAATTGGGTTCGGAATGACGGTGGTGATCACCAAGGTGGCGGAGCACCAGCGCAAGATGAATCCCGCCGCCGTGGGTCACCCCTCCGAAGGGGTGGTGGTTGGGTCCATGGTTTTCTTTGGGGTTCTCGGAGTTCCTCTTGCGATTACTTTCAGTGTTCCATTTGCTCTAGCATCAATATACTGCAGCGCTTCAGGAGCAGGCCAAGGTTTATCTTTGGGAGTCCTCAATCTTGCAATTGTGGTGCCACAGATGGTGGTGTCTACATTAAGTGGTCCTTGGGATGCTTTGTTTGGTGGTGGCAACTTGCCGGCTTTCATGGTGGGTGCCGCGGCGGCCGCATTGAGCGCCATAATGGCGATTGTCTTGCTGCCAACTCCAAAGCCAGCTGATGAGGCCAAGGCTTCAAGCATGATGGCAGGGGGCTTTCACTAG 1536 0.5645 MEAPSPTKPNDPTKPSNTSTTLSLEAGPAQASPLRKMFAVASIAAGIQFGWALQLSLLTPYVQLLGVPHAAASFIWLCGPISGLVVQPIVGYYSDHCTSRFGRRRPFILGGALAVAVAVFLIGYAADIGYAAGDDISKTTRPRAVGVFVIGFWILDVANNMLQGPCRAFLADLAAGDQRKTRIANGFFSFFMAVGNVLGYAAGSYKGLHKMFPFTETKACDVFCANLKSCFFFSILLLLFLATVALLYVKDKQVEARALDDATQPSCFFQLFGALKELKRPMWMLMLVTAVNWVGWFPYFLFDTDWMGREVYGGQVGEDAYANGVRVGSLGLMVNAVVLGFMSLAVEPLGKMVGGVKRLWAIVNFILAIGFGMTVVITKVAEHQRKMNPAAVGHPSEGVVVGSMVFFGVLGVPLAITFSVPFALASIYCSASGAGQGLSLGVLNLAIVVPQMVVSTLSGPWDALFGGGNLPAFMVGAAAAALSAIMAIVLLPTPKPADEAKASSMMAGGFH* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1266 511 MobiDBLite consensus disorder prediction 1 24 - -
Gso16g1266 511 Pfam MFS/sugar transport protein 37 297 - -
Gso16g1266 511 Gene3D MFS general substrate transporter like domains 31 492 IPR036259 -
Gso16g1266 511 SUPERFAMILY MFS general substrate transporter 36 496 IPR036259 -
Gso16g1266 511 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 27 498 - -
Gso16g1266 511 PANTHER SUGAR TRANSPORTER 27 498 - -
Gso16g1266 511 TIGRFAM GPH_sucrose: sucrose/H+ symporter 33 495 IPR005989 GO:0005887|GO:0008515|GO:0015770
Gso16g1266 511 CDD MFS_SLC45_SUC 37 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1266 Gso-Chr16 31980216 31983714 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1266 14 511 Sucrose Transporter Gene Family AT1G22710 62.795 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1266 K15378 - gmx:100786411 977.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso10g1953 10 46494399 46497953 Gso16g1266 16 31980216 31983714 PCT