Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1265 ATGGAGGAGCCACAACCAGGACCCAGCCCGTTACGCAAAATGATTTTGGTGTCGTCAATGGCGGCCGGTATCCAATTTGGGTGGGCCCTACAGCTCTCCCTTCTCACCCCATATGTTCAAACCCTAGGCGTCCCGCATGCTTGGGCCTCATTTATTTGGCTATGTGGCCCGATATCTGGGCTGCTGGTGCAGCCCATTGTGGGCTACAGCAGCGACCGATGCCAATCCCGTTTCGGTCGTCGCCGTCCCTTTATCCTAGCCGGGTCTTTGGCCGTCGCCATTGCTGTGTTCCTAATTGGTTACGCGGCCGATATAGGACACGCGGCAGGCGACAACCTGACCCAAAAGACTCGGCCACGTGCAGTGGCGATCTTCGTGATCGGGTTTTGGATCCTCGACGTGGCTAACAACATGCTCCAGGGTCCATGCCGTGCCTTTCTGGGCGACCTCGCTGCCGGGGATGAGAAAAAGACAAAGGCAGCCAATGCCTTCTTCTCTTTCTTCATGGCCGTCGGCAACATCCTGGGCTATGCTGCGGGATCCTACGACGGCCTCCACCGCCTCTTCCCCTTCACGGAAACCGAGGCATGCAACGTCTTCTGCGCAAACCTCAAGAGTTGCTTCTTCTTCGCTATCGTCCTCCTGGTGGTCCTCACCACCTTGGTGCTGATTACCGTGAAAGAAACTCCCTACACGCCAAAGGCAGAGAAGGAAACCGAAGATGCAGAGAAGACACACTTCTCGTGCTTCTGCGGAGAACTTTGTCTTGCATTCAAGGGGCTGAAGAGGCCAATGTGGATGTTGATGTTGGTGACCGCCGTGAACTGGATAGCGTGGTTCCCTTACTTCTTGTTCGACACCGATTGGATGGGTCGTGAGGTGTACGGTGGTGACGTGGGGCAGAAGGCGTACGATTCGGGAGTTCATGCAGGTTCTCTAGGGCTAATGTTGAATGCGGTGGTGTTGGCTGTGATGTCATTGGCAATTGAACCGTTGGGGCGTGTGGTTGGGGGAATCAAGTGGTTGTGGGGAATCGTTAACATCTTGTTGGCTATATGCTTGGGAATGACCGTTCTCATCACAAAGATCGCTGAGCATGAACGTCTTCTTAACCCTGCTTTGGTTGGGAACCCTTCCCTCGGTATCAAAGTTGGTTCCATGGTTTTCTTCTCTGTCCTTGGAATCCCTCTTGCGATTACTTTCAGTGTCCCATTTGCTCTAGCATCTATATACTCCAGCACTTCCGGAGCAGGCCAAGGTCTATCTTTGGGTGTCCTTAATATTGCAATTGTCGTTCCACAGATGATAGTATCAACCATAAGTGGACCTTGGGATGCCTTGTTCGGCGGTGGAAACTTGCCTGCATTCGTGTTGGGTGCGGTGGCCGCCGTCGTGAGTGCAATATTAGCAGTTCTTCTGCTGCCAACTCCAAAGAAAGCTGATGAGGTCAGGGCTTCTAGCCTCAACATGGGAAGTTTGCATTAG 1485 0.5327 MEEPQPGPSPLRKMILVSSMAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLLVQPIVGYSSDRCQSRFGRRRPFILAGSLAVAIAVFLIGYAADIGHAAGDNLTQKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDEKKTKAANAFFSFFMAVGNILGYAAGSYDGLHRLFPFTETEACNVFCANLKSCFFFAIVLLVVLTTLVLITVKETPYTPKAEKETEDAEKTHFSCFCGELCLAFKGLKRPMWMLMLVTAVNWIAWFPYFLFDTDWMGREVYGGDVGQKAYDSGVHAGSLGLMLNAVVLAVMSLAIEPLGRVVGGIKWLWGIVNILLAICLGMTVLITKIAEHERLLNPALVGNPSLGIKVGSMVFFSVLGIPLAITFSVPFALASIYSSTSGAGQGLSLGVLNIAIVVPQMIVSTISGPWDALFGGGNLPAFVLGAVAAVVSAILAVLLLPTPKKADEVRASSLNMGSLH* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1265 494 CDD MFS_SLC45_SUC 14 472 - -
Gso16g1265 494 TIGRFAM GPH_sucrose: sucrose/H+ symporter 10 479 IPR005989 GO:0005887|GO:0008515|GO:0015770
Gso16g1265 494 PANTHER SUGAR TRANSPORTER 5 480 - -
Gso16g1265 494 Pfam MFS/sugar transport protein 26 278 - -
Gso16g1265 494 Gene3D MFS general substrate transporter like domains 8 474 IPR036259 -
Gso16g1265 494 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 5 480 - -
Gso16g1265 494 SUPERFAMILY MFS general substrate transporter 1 479 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1265 Gso-Chr16 31973591 31975867 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1265 8 477 Sucrose Transporter Gene Family AT1G22710 65.199 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1265 K15378 - gmx:100785899 943.725
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1265 16 31973591 31975867 Gso10g1953 10 46494399 46497953 PCT