Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1263 ATGGAGGAGCCACAACCAGGACCCAACCCGTTACGCAAAATGATTTTGGTGTCATCAATGGCGGCCGGTATCCAATTCGGGTGGGCCCTACAGCTCTCCCTTCTCACCCCATACGTTCAAACCCTAGGTGTCCCGCACGCTTGGGCCTCATTTATTTGGCTATGTGGCCCGATATCTGGGCTGCTGGTGCAGCCCATTGTGGGCTACAGCAGCGACCGATGTCAATCCAGTTTCGGCCGCCGCCGTCCCTTTATCCTAGCCGGGTCTTTGGCCGTCGCCATTGCCGTGTTCCTAATTGGTTACGCGGCCGATATAGGACACGCGACAGGCGACGACCTGACCCAAAAGACCCGGCCACGTGCAGTGGCGATCTTCGTGATCGGGTTTTGGATCCTCGACGTGGCTAACAACATGCTCCAGGGCCCATGTCGTGCCTTCCTGGGCGACCTCGCTGCCGGGGATGAGAAAAAGACAAAGGCAGCCAACGCCTTCTTCTCTTTCTTCATGGCCGTCGGCAACATCCTGGGCTATGCTGCGGGATCCTACGACGGCCTCCACCGCCTCTTTCCCTTCACGGAAACCGAGGCATGCAACGTCTTCTGCGCAAACCTCAAGAGTTGCTTCTTCTTTGCTATCGTCCTCCTGGTGGTCCTCACCACCTTGGTGCTGATTACCGTGAAAGAAACTCCCTACACGCCAAAGGCAGAGAAGGAAACCGAAGATGCAGAGAAGACACACTTCTCGTGCTTCTGCGGAGAACTTTGTCTTGCATTCAAGGGGCTGAAGAGGCCAATGTGGATGTTGATGTTGGTGACCGCCGTGAACTGGATAGCGTGGTTCCCTTACTTCTTGTTTGACACCGATTGGATGGGTCGTGAGGTGTACGGTGGTGACGTGGGGCAGAAGGCGTACGATTCGGGAGTTCATGCAGGTTCTCTAGGGCTAATGTTGAATGCGGTGGTGTTGGCTGTGATGTCATTGGCAATTGAACCGTTGGGGCGTGTGGTTGGGGGAATCAAGTGGTTGTGGGGAATCGTTAACATCTTGTTGGCTATATGCTTGGGAATGACCGTTCTCATCACAAAGATCGCTGAGCATGAACGTCTTCTTAACCCTGCTTTGGTTGGGAACCCTTCCCTCGGTATCAAAGTTGGTTCCATGGTTTTCTTCTCTGTCCTTGGAATCCCTCTTGCGATTACTTTCAGTGTCCCATTTGCTCTAGCATCTATATACTCCAGCACTTCCGGAGCAGGCCAAGGTCTATCTTTGGGTGTGCTTAATATTGCAATTGTCGTTCCACAGATGATAGTATCAACCATAAGTGGACCATGGGATGCCTTGTTCGGCGGTGGAAACTTGCCTGCATTCGTGTTGGGTGCGGTGGCCGCCGTCGTGAGTGCAATATTAGCAGTTCTTCTGCTGCCAACTCCAAAGAAAGCTGATGAGGCCAGGGCTTCTAGCCTCAACGTGGGAGGTTTCCATTAG 1485 0.5354 MEEPQPGPNPLRKMILVSSMAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLLVQPIVGYSSDRCQSSFGRRRPFILAGSLAVAIAVFLIGYAADIGHATGDDLTQKTRPRAVAIFVIGFWILDVANNMLQGPCRAFLGDLAAGDEKKTKAANAFFSFFMAVGNILGYAAGSYDGLHRLFPFTETEACNVFCANLKSCFFFAIVLLVVLTTLVLITVKETPYTPKAEKETEDAEKTHFSCFCGELCLAFKGLKRPMWMLMLVTAVNWIAWFPYFLFDTDWMGREVYGGDVGQKAYDSGVHAGSLGLMLNAVVLAVMSLAIEPLGRVVGGIKWLWGIVNILLAICLGMTVLITKIAEHERLLNPALVGNPSLGIKVGSMVFFSVLGIPLAITFSVPFALASIYSSTSGAGQGLSLGVLNIAIVVPQMIVSTISGPWDALFGGGNLPAFVLGAVAAVVSAILAVLLLPTPKKADEARASSLNVGGFH* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1263 494 Pfam MFS/sugar transport protein 26 278 - -
Gso16g1263 494 Gene3D MFS general substrate transporter like domains 8 477 IPR036259 -
Gso16g1263 494 SUPERFAMILY MFS general substrate transporter 1 480 IPR036259 -
Gso16g1263 494 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 5 480 - -
Gso16g1263 494 CDD MFS_SLC45_SUC 14 472 - -
Gso16g1263 494 TIGRFAM GPH_sucrose: sucrose/H+ symporter 10 479 IPR005989 GO:0005887|GO:0008515|GO:0015770
Gso16g1263 494 PANTHER SUGAR TRANSPORTER 5 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1263 Gso-Chr16 31952420 31954612 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1263 8 494 Sucrose Transporter Gene Family AT1G22710 63.563 0.0 636
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1263 K15378 - gmx:100785899 933.71