Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1262 ATGGAACAACCTCCTTCCTCGTCTCTTCAGGTGGAGACAGCACAACAACCGGGACCTAGTCCTCTCCGAAAAATGTTCGCTGTCTCGTCAATCGCCGCGGGAATTCAATTCGGGTGGGCCCTACAGCTCTCTCTTCTGACACCGTACGTCCAGACCCTCGGCGTCCCTCACGCATGGGCGTCGTTCATTTGGCTCTGCGGCCCAATCTCTGGGCTGCTTGTGCAGCCCATTGTAGGGTACAGCAGCGACCGATGCAGATCCCGCTTTGGTCGCCGCCGTCCCTTCATCTTCGTCGGAGCCATCGCCGTCGCAATTGCTGTGTTCCTCATCGGCTATGCAGCCGATATAGGACACGCGGCGGGCGATGACCTCACGAAGAAGACCCGTCCACGCGCGGTGGTGGTTTTTGTGGTCGGCTTCTGGATCCTGGACGTGGCCAACAACATGCTCCAGGGTCCATGCCGCGCCTTCCTCGGTGACCTCGCCGCCGGGGACCACCGCAAGACGAGGACCGCCAACGCCTTCTTCTCGTTCTTCATGGCCATCGGAAACGTCCTCGGCTACGCAGCCGGCTCCTACGACAAACTCCACCGCGCCTTCAAATTCACACAAACCGAAGCGTGTGACGTGTTCTGTGCAAACCTCAAGAGCTGCTTCTTCTTCTCAATTGTCCTCCTCCTGGTTCTTTGTTTCGTTGTGCTCATTTGCGTCGACGACCCACAATTCACGCCACGTGGCGATGACAACAATGGCGAAAACGACGGCGTTTCGGGGTCGTGCTTTGGGGAACTCTGGGCTGCGTTTAAAGGTCTAAAGAGGCCAATGTGGTTGTTGATGGTAGTGACCGCTATAAACTGGGTGGCGTGGTTTCCGTACATGCTGTTCGATACTGATTGGATGGGGCGTGAGGTGTACGGTGGTAAGGTGGGGGAGAAAGCATACGATTCGGGAGTGCATAAGGGGGCGTTGGGGCTTATGCTGAACTCTGTCGTTTTGGCATTGATGTCGTTGACGGTGGAACCGTTGGGTCGTTTCGTTGGGGGAGTTAAGTGGCTATGGGGAATCGTAAACGTAATTCTCGCCGTTTGCATGGCAATGACGGTGGTTATCACAAGGGCTGCAGAACATGAACGGAAAAACGGCGTTTCTGCTGTTGGGCATCCCTCAGTTGGTGTGCAAGTGGCTGCATTGACTTTCTTCTCCGTCCTTGGTGTTCCTCTTGCTATTACTTTCAGCGTCCCCTTTGCACTGGCATCTATATACTCCTCCACTTCAGGAGCAGGCCAAGGTTTATCCTTGGGTGTCCTCAATGTTGCAATTGTCGTGCCACAGATGATAGTATCGGCTATAAGTGGACAGTGGGATAAGTGGTTTGGTGGTGGCAACTTGCCGGCGTTTGTGTTGGGTGCCGTGGCGGCCGCCGTGAGTGCCGTGTTAGCGGTTGTTCTGCTGCCAACACCAAAGCCAGCAGATGTGGCCAAGGTTACTTCCGTCACTGCTGGGAGTTTCCATTAG 1515 0.5545 MEQPPSSSLQVETAQQPGPSPLRKMFAVSSIAAGIQFGWALQLSLLTPYVQTLGVPHAWASFIWLCGPISGLLVQPIVGYSSDRCRSRFGRRRPFIFVGAIAVAIAVFLIGYAADIGHAAGDDLTKKTRPRAVVVFVVGFWILDVANNMLQGPCRAFLGDLAAGDHRKTRTANAFFSFFMAIGNVLGYAAGSYDKLHRAFKFTQTEACDVFCANLKSCFFFSIVLLLVLCFVVLICVDDPQFTPRGDDNNGENDGVSGSCFGELWAAFKGLKRPMWLLMVVTAINWVAWFPYMLFDTDWMGREVYGGKVGEKAYDSGVHKGALGLMLNSVVLALMSLTVEPLGRFVGGVKWLWGIVNVILAVCMAMTVVITRAAEHERKNGVSAVGHPSVGVQVAALTFFSVLGVPLAITFSVPFALASIYSSTSGAGQGLSLGVLNVAIVVPQMIVSAISGQWDKWFGGGNLPAFVLGAVAAAVSAVLAVVLLPTPKPADVAKVTSVTAGSFH* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1262 504 PANTHER SUCROSE TRANSPORT PROTEIN SUC7-RELATED 1 491 - -
Gso16g1262 504 CDD MFS_SLC45_SUC 25 466 - -
Gso16g1262 504 Pfam MFS/sugar transport protein 26 288 - -
Gso16g1262 504 Gene3D MFS general substrate transporter like domains 19 484 IPR036259 -
Gso16g1262 504 PANTHER SUGAR TRANSPORTER 1 491 - -
Gso16g1262 504 TIGRFAM GPH_sucrose: sucrose/H+ symporter 21 488 IPR005989 GO:0005887|GO:0008515|GO:0015770
Gso16g1262 504 SUPERFAMILY MFS general substrate transporter 23 489 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1262 Gso-Chr16 31928500 31931856 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1262 6 489 Sucrose Transporter Gene Family AT1G22710 63.951 0.0 645
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1262 K15378 - gmx:100785359 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso16g1262 16 31928500 31931856 Gso2g0621 2 6446468 6449845 GST