Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1255 ATGATAAATAATACTGCACCTGACAACCCAACAGCCAACAGGCCCAACACTGTAGCAACTAGTTTTCTTGTTGGCATTGTCATTCAGCTGGTTGTCTCCAGAAAAAATTGTTGGCAACCTCAATTCATTGAAAGTAATTTATTAACTCCTAATGCAATTCACAAATCAAGAATTCACTTCGGTAAAGCCATGGAAGCTGTTGCTGATACATCAAATGTTACTTTGAAAACAAGGTTTTCAACGTATTACACTGCCATCATGCCCTCTGGATCAATCTATTTTATCAAGAAACTAAACTGTTCTAACAAGATATTGCCGTTGGGAAGTCATGATAAATTTGGAAAAGCGCTAGAAGTCTATGCAAAATTGAACAATTCAAATGTCATGACTCCTTTGGCCTATGCTCTGTCCATTGATACTGCTTATATACTATATGAATATATCTCAAATGGCTCCCTCTATGATGTTCTTCATGGAAGCATGTTAGATTGGGGTAGCAGATATACTATAGCCGTTGGGGTGGCTCAAGGACTTTCTTTTCTTCATGGATTTGCCTCTAGTCCAATACTACTCCTTGACCTATCAAGTAAAAGTATTATGTTGAAGTCCCTCAAGGAGCCTCAAGTTGGGGATGTTGAACTCTACCATGTGATTAATCCCTTAAAGAGTACAGGGAATTTTTCTGAAGTTGTTGGTTCTGTTGGTTATATTCCTCCAGAGTATGCATACACAATGACAGTAACAATTGCTGGGAATGTCTACAGTTTTGGTGTCATTCTGCTTGAACTGCTGACAGGAGAACCTCCGGTGACAGATGGAAAAGAATTGGTCAAGTGGGTTTTGGATCATTCAACAAACCCACAATACATTCTTGATTTTAATGTCAGTAGATCATCACAAGAAGTCAGAAGCCAGATGCTTGCAATTCTCAAGATTGCTCTTGTTTGTGTTAGTACATCCCCAAAGGCAAGACCAAATATGAACACTGTGCTTCAGATGCTTCTTAATGTTGGATGA 1017 0.3874 MINNTAPDNPTANRPNTVATSFLVGIVIQLVVSRKNCWQPQFIESNLLTPNAIHKSRIHFGKAMEAVADTSNVTLKTRFSTYYTAIMPSGSIYFIKKLNCSNKILPLGSHDKFGKALEVYAKLNNSNVMTPLAYALSIDTAYILYEYISNGSLYDVLHGSMLDWGSRYTIAVGVAQGLSFLHGFASSPILLLDLSSKSIMLKSLKEPQVGDVELYHVINPLKSTGNFSEVVGSVGYIPPEYAYTMTVTIAGNVYSFGVILLELLTGEPPVTDGKELVKWVLDHSTNPQYILDFNVSRSSQEVRSQMLAILKIALVCVSTSPKARPNMNTVLQMLLNVG* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1255 338 ProSiteProfiles Protein kinase domain profile. 68 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1255 338 SUPERFAMILY Protein kinase-like (PK-like) 79 334 IPR011009 -
Gso16g1255 338 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 34 336 - -
Gso16g1255 338 Pfam Protein kinase domain 79 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso16g1255 338 Gene3D Phosphorylase Kinase; domain 1 49 147 - -
Gso16g1255 338 Gene3D Transferase(Phosphotransferase) domain 1 148 337 - -
Gso16g1255 338 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 34 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1255 Gso-Chr16 31853246 31858571 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1255 39 337 Receptor kinase-like Gene Family AT2G41820 39.490 7.99e-61 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso16g1255 Pkinase 3.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1255 - - gsj:114390934 659.448