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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Gso16g1224
ATGGACATGGATGTTTGCCGAAATATATCAGTTTCTTCAAGTGAGTGTCAGCAAGAGCTTCCCACCCTTGATGACCTTTTCTGTCATCAGAACACGGAAGTGGATTTTGGCATGGAATGGTTATCAGTGTTTGTGGAAGACTGTTTCTCTAGTAGGCCAAGTTGCCTCTTGCCACCCTCTGGTGGTGGTGTTCAAACCACAAGCACTAGCACCAAGCCTTCTTCAGGCACAATAATGCCAAGACCCCAACAAAGTCATCACTGTCCTTTGCAGAATTTTGCTGTGCCAGGGAAAGCAAGGAGCAAGAGAAAGAGACTTTCAGCCCCTAGAACAACAAAACACACCCTAAGCACATGGTCACAACATTTCAGCTCACAGAATGATGGGGTGAGTTCTGACCCTCCTCTCTTGAAACAAGCATATTGGTTGGCTGATAGTGAACTCATAGTCCCCAAGAAGAAGGATGTTGAGCAAGAAGAGGGGGTTGTTGTGGTGGTGAAGAAGGAGAAATTGGGGGATTATTATGATGATGAGGGTGATGAAGTTAACAACAATAATACCAACAATAATAATAATGATAATGTGCAGCACCCAATTCCAAGAAGGTGCACACATTGTCTAGCTCAGAGGACCCCACAGTGGAGGGCAGGACCATTGGGTCCAAAGACACTATGCAATGCATGTGGGGTGAGGTACAAGTCTGGAAGGTTGTTGCCAGAGTATAGGCCAGCCAAGAGCCCTACTTTTGTAAGCTATTTGCATTCCAATTCACACAAGAAAGTCATGGAGATGAGAATGGGTGTTGGTGTTGCTGTTCTTTCTACAGACAAGAAGTAG
837
0.4528
MDMDVCRNISVSSSECQQELPTLDDLFCHQNTEVDFGMEWLSVFVEDCFSSRPSCLLPPSGGGVQTTSTSTKPSSGTIMPRPQQSHHCPLQNFAVPGKARSKRKRLSAPRTTKHTLSTWSQHFSSQNDGVSSDPPLLKQAYWLADSELIVPKKKDVEQEEGVVVVVKKEKLGDYYDDEGDEVNNNNTNNNNNDNVQHPIPRRCTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRLLPEYRPAKSPTFVSYLHSNSHKKVMEMRMGVGVAVLSTDKK*
279
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Gso16g1224
278
CDD
ZnF_GATA
202
249
IPR000679
GO:0006355|GO:0043565
Gso16g1224
278
Gene3D
-
193
262
IPR013088
GO:0006355|GO:0008270
Gso16g1224
278
PANTHER
GATA TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN
3
269
-
-
Gso16g1224
278
Pfam
GATA zinc finger
203
237
IPR000679
GO:0006355|GO:0043565
Gso16g1224
278
MobiDBLite
consensus disorder prediction
59
85
-
-
Gso16g1224
278
SMART
GATA_3
197
251
IPR000679
GO:0006355|GO:0043565
Gso16g1224
278
PANTHER
GATA TRANSCRIPTION FACTOR
3
269
-
-
Gso16g1224
278
MobiDBLite
consensus disorder prediction
181
196
-
-
Gso16g1224
278
MobiDBLite
consensus disorder prediction
99
133
-
-
Gso16g1224
278
SUPERFAMILY
Glucocorticoid receptor-like (DNA-binding domain)
199
261
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Gso16g1224
Gso-Chr16
31568766
31570664
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Gso16g1224
38
265
C2C2-Gata Transcription Factor Family
AT4G32890
41.126
4.65e-43
147
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
C2C2-GATA
Gso16g1224
GATA
1.2e-14
CL0167
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Gso16g1224
-
-
gmx:100776805
525.013
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Gso16g1224
16
31568766
31570664
Gso2g0593
2
6185565
6187457
GST
Gso19g0937
19
36386221
36387655
Gso16g1224
16
31568766
31570664
PCT
Gso16g0346
16
3896815
3898223
Gso16g1224
16
31568766
31570664
PCT
Gso16g1224
16
31568766
31570664
Gso19g0937
19
36386221
36387655
PCT
Gso16g1224
16
31568766
31570664
Gso16g0346
16
3896815
3898223
PCT
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