Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso16g1208 ATGGAAACCTCTAATAACAACCATGATGCTCCTCCTCCACCTCTACTTAAAGACCTGAAGGTGACCATCCACAATGCCTCCATGATTTTTCCATCCAAAGAGATTGAGAGAAAGTCCCTTTTCTTGTCAAACATTGACAAGGTCCTCAACTTTGATGTGGAAACGGTTCACTTCTTTGGTGCCCACAAAGATTTTCCTCCTCATGTTGTGAATGAGAGGCTCAAGAATGCCCTAGAGGATGCCCTTGTGGTTTATGACTTCTTGGGTGGAAGATTGAAGCTAAACTATGACACCAAAAGATTGGAGATGGATTGTAATCCAGAGGGAGCTGGATTCGTGGTGGCTTCCAGCGAGTACAATTTGGATCAGATAGGGGACTTGGATTATCCAAATCCAGCTTTTGCACAATTGGTACATCAGAATAAGGATTTTCTTAAAGATGGTGATGTTCCACTCTGTGTTGCCCAGGTGACATCCTTCAAGTGTGGTGGTTTTGCAATTGGCATCTCTACTAGCCACACCACCTTTGATGGCCTCAGCTTCAAAACCTTCCTAGACAACATTGCTTCAATAGCTGCTAAGAAGCCCTTGGCTGTCACGCCCTGCCATGACAGGCACCTCCTAGCCGCTCGATCCCCACCACGTGTCACCTTCCCACATCCTGAGATGCTCAAGCTAAGTGACCAGCTCCCAACATGCCCCGAGTCCAACATCTTTGAGGCCTCCACCGAACAACTTGATTTCAAGGTCTTCAAACTAACATCAAACGACATCACAAAATTGAAGGAAGAGGCTAGGAATTCTTCAATTAGTGGTGGCCTAAGTACTAAATGTGTCACTGGCTTTAACGTTATCACTGCCTACATATGGAGATGCAAGGCACTTTCGTGCTACAATGATGAGAACCCTAATAGGTCATCAACTATACTATATGCTGTAGATATACGTTCAAGATTGAACCCTCCATTGCCTAAATCATACGCGGGTAACGCAGTGTTAACTGCTTATGCCACGGCAAAGTGTAAGGAGCTAGAAGAATGGCCTTTTATGAAGCTAGTTGAAATGGTGCGTGAGGGAGCAACTAGGATGACAAATGAGTATGCAAGATCTATCATAGATTGGGGAGAGATAAACAATGGGTTTCCCAATGGGGAGGTTTTGGTGTCTTCATGGTGGAGATTAGGGTTTGAGGAAGTGGAGTATCCGTGGGGGAAGCCAAAGTATTGTTGCCCAGTGGTGTATCATAAGAAGGATATTATTTTGTTGTTTCCTCCGGTTGGTGGAGGTGAAGGGGTGAGTATTATTGTGGCTCTTCCTCCTAAGGAAATGGAAAAATTCCATGGGCTCTTCAACAAGTTCTTGACTTCACATTGA 1374 0.4476 METSNNNHDAPPPPLLKDLKVTIHNASMIFPSKEIERKSLFLSNIDKVLNFDVETVHFFGAHKDFPPHVVNERLKNALEDALVVYDFLGGRLKLNYDTKRLEMDCNPEGAGFVVASSEYNLDQIGDLDYPNPAFAQLVHQNKDFLKDGDVPLCVAQVTSFKCGGFAIGISTSHTTFDGLSFKTFLDNIASIAAKKPLAVTPCHDRHLLAARSPPRVTFPHPEMLKLSDQLPTCPESNIFEASTEQLDFKVFKLTSNDITKLKEEARNSSISGGLSTKCVTGFNVITAYIWRCKALSCYNDENPNRSSTILYAVDIRSRLNPPLPKSYAGNAVLTAYATAKCKELEEWPFMKLVEMVREGATRMTNEYARSIIDWGEINNGFPNGEVLVSSWWRLGFEEVEYPWGKPKYCCPVVYHKKDIILLFPPVGGGEGVSIIVALPPKEMEKFHGLFNKFLTSH* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso16g1208 457 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 17 454 - -
Gso16g1208 457 Pfam Transferase family 19 447 - -
Gso16g1208 457 Gene3D - 234 453 IPR023213 -
Gso16g1208 457 Gene3D - 17 224 IPR023213 -
Gso16g1208 457 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 17 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso16g1208 Gso-Chr16 31336443 31343480 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso16g1208 19 454 Monolignol Biosynthesis Gene Families AT5G48930 30.263 1.14e-53 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso16g1208 K13065 K15400 gmx:100305576 933.71